基于 DNA 超分子水凝胶的保护性 NK 细胞储库用于增强三阴性乳腺癌治疗
Protective NK Cell Reservoir Based on DNA Supramolecular Hydrogel for Enhanced Triple-Negative Breast Cancer Therapy.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Enhancing Translation of H&E to IHC with Robust Tumor-Infiltrating Lymphocytes Quantification Using Deep Generative Models: A Feasibility Study.
Enhancing Translation of H&E to IHC with Robust Tumor-Infiltrating Lymphocytes Quantification Using Deep Generative Models: A Feasibility Study.
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乳腺癌是女性肿瘤学死亡的主要原因,因此治疗反应预测成为优先事项。虽然TIL(肿瘤浸润淋巴细胞)(TILs)被公认为预后生物标志物,但在苏木精和伊红(H&E)切片上的视觉量化存在观察者间变异。虚拟H&E到IHC染色转换代表了传统、劳动密集型IHC的潜在替代方案。在这项可行性研究中,我们开发了一个深度生成框架,从H&E图像块合成虚拟IHC图像块,并开发了一个用于TILs量化的自动化流程。为了促进H&E-IHC图像对齐,H&E切片被脱色并重新染色用于IHC,随后进行粗到细的配准。
我们的框架包含两个关键组件,以更好地合成TIL特异性显色剂:(1)由细胞分割图引导的空间注意力机制,以聚焦于小型TILs,以及(2)基于颜色分离的显色剂损失函数,用于准确合成二氨基联苯胺(DAB)或碱性磷酸酶(AP)。
此外,我们提出了一个TILs量化流程,旨在考虑重叠区域中的细胞。整合空间注意力和显色剂损失显著提高了性能,在表现最佳的模型中,每个图像块的DAB平均绝对误差(MAE)从12.793降低到9.480,AP从21.113降低到17.755(两者p < 0.001)。读者研究表明,自动化流程与病理学家达到了中等到高的绝对计数一致性(组内相关系数(ICC),0.565-0.852)以及强的相对密度排名(Spearman,0.721-0.798),超过了读者间一致性。
此外,视觉评分确认合成的显色剂与真实IHC相当(p = 0.640)。
Breast cancer is the leading cause of female oncological mortality, making treatment response prediction a priority. While tumor-infiltrating lymphocytes (TILs) are recognized as prognostic biomarkers, visual quantification on hematoxylin and eosin (H&E) slides suffers from interobserver variability.
Virtual H&E-to-IHC stain translation represents a potential alternative to conventional, labor-intensive IHC. In this feasibility study, we developed a deep generative framework to synthesize virtual IHC patches from H&E patches and an automated pipeline for TILs quantification. To facilitate H&E-IHC image alignment, H&E slides were destained and restained for IHC, followed by a coarse-to-fine registration.
Our framework incorporates two key components for better synthesis of TIL-specific chromogen: (1) a spatial attention mechanism guided by a cell segmentation map to focus on small TILs and (2) a chromogen loss function based on color separation for accurate diaminobenzidine (DAB) or alkaline phosphatase (AP) synthesis.
Furthermore, we propose a TILs quantification pipeline designed to account for cells in overlapping regions. Integrating spatial attention and chromogen loss significantly improved performance, reducing mean absolute error (MAE) from 12. 793 to 9. 480 for DAB and from 21. 113 to 17. 755 for AP (p < 0.
001 for both) per patch in the best-performing model. Reader studies demonstrated that the automated pipeline achieved moderate to high absolute count agreement with pathologists (intraclass correlation coefficient (ICC), 0. 565-0. 852) and strong relative density ranking (Spearman, 0. 721-0. 798) that exceeded inter-reader consistency.
Furthermore, visual scoring confirmed that synthesized chromogens were comparable to ground truth IHC (p = 0. 640).
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