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基于神经网络和统计分布建模的无标记 CAR-T 细胞表达分析

英文原题:Label-free chimeric antigen receptor T-cell expression analysis using neural networks and statistical distribution modeling.

查看英文原题

Label-free chimeric antigen receptor T-cell expression analysis using neural networks and statistical distribution modeling.

PubMed 2025/08/06(内容时间) Biochem Biophys Res Commun Q3 · IF 2.5(JCR 2025)

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中文摘要

CAR-T(CAR-T)细胞疗法已成为血液系统恶性肿瘤的有前景治疗方法。准确监测 CAR 表达水平对于优化疗效和保障患者安全至关重要。传统评估依赖基于抗体的流式细胞术(FCM),过程耗时且可能改变细胞特性。本研究提出一种新型无标记方法,利用明场显微成像和深度学习预测 CAR 表达率。该方法将卷积神经网络与分类得分分布分析相结合,并采用高斯拟合估算 CAR 表达率。在 4 位供者样本中,其预测值与标准 FCM 测量结果的误差均在 5% 以内,最大预测误差从 13% 降至 4.4%。这是首次成功实现对 T 细胞 CAR 表达率的无标记预测,为 CAR-T 细胞实时监测和制备提供了实用方案。该方法仅依赖标准明场显微镜,可直接用于制备和研究场景。

展开英文摘要原文

Chimeric antigen receptor T (CAR-T)-cell therapy has emerged as a promising treatment for hematologic malignancies. Accurate monitoring of CAR expression levels is essential for optimizing therapeutic efficacy and ensuring patient safety. Conventional assessments rely on antibody-based flow cytometry (FCM)-a labor-intensive process that may alter cellular properties.

This study introduces a novel label-free method for predicting CAR expression rates using bright-field microscopy and deep learning. The proposed approach integrates convolutional neural networks with classification score distribution analysis by employing Gaussian fitting to estimate CAR expression rates. It achieved a prediction accuracy within 5 % of standard FCM measurements across four donors, reducing the maximum prediction error from 13 % to 4. 4 %.

This study represents the first successful label-free prediction of CAR expression rates in T cells, offering a practical solution for real-time monitoring and manufacturing of CAR-T cells. This method is readily applicable to manufacturing and research settings, as it relies solely on standard bright-field microscopy.

论文信息

作者
Ueda T、Kobayashi R、Kasai N、Iida T、Oishi K、Ogaki S、Sakagami J
单位
Solution Planning Department, Healthcare Business Unit, Nikon Corporation, 1-5-20 Nishioi, Shinagawa-ku, Tokyo, 140-8601, Japan. Electronic address: Takehiko.Ueda@nikon.com.Japan
期刊
Biochemical and biophysical research communications2025 Sep 16
原文标识
PubMed 40795576 · DOI 10.1016/j.bbrc.2025.152454