基于 DNA 超分子水凝胶的保护性 NK 细胞储库用于增强三阴性乳腺癌治疗
Protective NK Cell Reservoir Based on DNA Supramolecular Hydrogel for Enhanced Triple-Negative Breast Cancer Therapy.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Personalized treatment decision-making using a machine learning-derived lactylation signature for breast cancer prognosis.
Personalized treatment decision-making using a machine learning-derived lactylation signature for breast cancer prognosis.
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MLLS 代表了一种有前景的预后生物标志物,并可能支持乳腺癌的个性化治疗策略,特别是在识别可能从免疫治疗中获益的候选者方面。
乳腺癌是一种具有复杂分子特征的异质性恶性肿瘤,使得准确的预后判断和治疗分层尤为困难。新出现的证据表明,乳酸化作为一种新型翻译后修饰,在肿瘤进展和免疫调节中发挥关键作用。
为解决乳腺癌异质性,我们利用通过随机生存森林(RSF)和单因素Cox回归分析筛选的乳酸化相关基因,开发了一种机器学习衍生的乳酸化特征(MLLS)。在多个数据集中应用了108种算法组合来构建和验证该模型。使用多种免疫浸润算法分析免疫微环境特征。进行了计算药物重定位分析,以确定高危患者的潜在治疗药物。
MLLS有效将患者分为低危和高危组,两组预后差异显著。该模型在多个队列中均展现出稳健的预测能力。免疫浸润分析显示,低危组表现出更高水平的免疫检查点(如 PD-1、PD-L1)以及B细胞、CD4 + T细胞和CD8 + T细胞更丰富的浸润,提示对免疫治疗可能有更好的应答。相反,高危组表现出与不良预后相关的免疫抑制特征。通过计算预测,甲氨蝶呤可能是高危患者的潜在治疗候选药物,但仍需实验验证。
Breast cancer is a heterogeneous malignancy with complex molecular characteristics, making accurate prognostication and treatment stratification particularly challenging. Emerging evidence suggests that lactylation, a novel post-translational modification, plays a crucial role in tumor progression and immune modulation.
To address breast cancer heterogeneity, we developed a machine learning-derived lactylation signature (MLLS) using lactylation-related genes selected through random survival forest (RSF) and univariate Cox regression analyses. A total of 108 algorithmic combinations were applied across multiple datasets to construct and validate the model. Immune microenvironment characteristics were analyzed using multiple immune infiltration algorithms. Computational drug-repurposing analyses were conducted to identify potential therapeutic agents for high-risk patients.
The MLLS effectively stratified patients into low- and high-risk groups with significantly different prognoses. The model demonstrated robust predictive power across multiple cohorts. Immune infiltration analysis revealed that the low-risk group exhibited higher levels of immune checkpoints (e.g., PD-1, PD-L1) and greater infiltration of B cells, CD4 + T cells, and CD8 + T cells, suggesting better responsiveness to immunotherapy. In contrast, the high-risk group showed immune suppression features associated with poor prognosis. Methotrexate was computationally predicted as a potential therapeutic candidate for high-risk patients, although experimental validation remains necessary.
The MLLS represents a promising prognostic biomarker and may support personalized treatment strategies in breast cancer, particularly for identifying candidates who may benefit from immunotherapy.
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