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基于机器学习衍生的乳酸化特征用于乳腺癌预后个性化治疗决策

英文原题:Personalized treatment decision-making using a machine learning-derived lactylation signature for breast cancer prognosis.

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Personalized treatment decision-making using a machine learning-derived lactylation signature for breast cancer prognosis.

PubMed 2025/05/08(内容时间) Front Immunol Q1 · IF 7(JCR 2025)

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研究概要

MLLS 代表了一种有前景的预后生物标志物,并可能支持乳腺癌的个性化治疗策略,特别是在识别可能从免疫治疗中获益的候选者方面。

研究思路结论见上方概要

乳腺癌是一种具有复杂分子特征的异质性恶性肿瘤,使得准确的预后判断和治疗分层尤为困难。新出现的证据表明,乳酸化作为一种新型翻译后修饰,在肿瘤进展和免疫调节中发挥关键作用。

为解决乳腺癌异质性,我们利用通过随机生存森林(RSF)和单因素Cox回归分析筛选的乳酸化相关基因,开发了一种机器学习衍生的乳酸化特征(MLLS)。在多个数据集中应用了108种算法组合来构建和验证该模型。使用多种免疫浸润算法分析免疫微环境特征。进行了计算药物重定位分析,以确定高危患者的潜在治疗药物。

MLLS有效将患者分为低危和高危组,两组预后差异显著。该模型在多个队列中均展现出稳健的预测能力。免疫浸润分析显示,低危组表现出更高水平的免疫检查点(如 PD-1、PD-L1)以及B细胞、CD4 + T细胞和CD8 + T细胞更丰富的浸润,提示对免疫治疗可能有更好的应答。相反,高危组表现出与不良预后相关的免疫抑制特征。通过计算预测,甲氨蝶呤可能是高危患者的潜在治疗候选药物,但仍需实验验证。

展开英文摘要原文

Breast cancer is a heterogeneous malignancy with complex molecular characteristics, making accurate prognostication and treatment stratification particularly challenging. Emerging evidence suggests that lactylation, a novel post-translational modification, plays a crucial role in tumor progression and immune modulation.

To address breast cancer heterogeneity, we developed a machine learning-derived lactylation signature (MLLS) using lactylation-related genes selected through random survival forest (RSF) and univariate Cox regression analyses. A total of 108 algorithmic combinations were applied across multiple datasets to construct and validate the model. Immune microenvironment characteristics were analyzed using multiple immune infiltration algorithms. Computational drug-repurposing analyses were conducted to identify potential therapeutic agents for high-risk patients.

The MLLS effectively stratified patients into low- and high-risk groups with significantly different prognoses. The model demonstrated robust predictive power across multiple cohorts. Immune infiltration analysis revealed that the low-risk group exhibited higher levels of immune checkpoints (e.g., PD-1, PD-L1) and greater infiltration of B cells, CD4 + T cells, and CD8 + T cells, suggesting better responsiveness to immunotherapy. In contrast, the high-risk group showed immune suppression features associated with poor prognosis. Methotrexate was computationally predicted as a potential therapeutic candidate for high-risk patients, although experimental validation remains necessary.

The MLLS represents a promising prognostic biomarker and may support personalized treatment strategies in breast cancer, particularly for identifying candidates who may benefit from immunotherapy.

论文信息

作者
Min S、Zhang X、Liu Y、Wang W、Guan J、Chen Y、Sun M、Wang Z
第一作者单位
Clinical Research Center, Suzhou Hospital of Anhui Medical University, Suzhou, Anhui, China.China
通讯作者单位
Research Laboratory Center, Guizhou Provincial People's Hospital, Guiyang, Guizhou, China.China
期刊
Frontiers in immunology2025
原文标识
PubMed 40406140 · DOI 10.3389/fimmu.2025.1540018