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基于 LinkNet 在结直肠癌病理图像上判定的 TIL(肿瘤浸润淋巴细胞)的预后意义

英文原题:Prognostic Significance of Tumor-Infiltrating Lymphocytes Determined Using LinkNet on Colorectal Cancer Pathology Images.

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Prognostic Significance of Tumor-Infiltrating Lymphocytes Determined Using LinkNet on Colorectal Cancer Pathology Images.

PubMed 2023/02/01(内容时间) JCO Precis Oncol Q2 · IF 4.7(JCR 2025)

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研究概要

所提出的基于 LinkNet 的自动 TIL 定量深度学习工作流程可作为 CRC 的有用工具。

中文摘要

TIL(肿瘤浸润淋巴细胞)在癌症中具有重要预后价值。然而,目前针对结直肠癌(CRC)开发的自动化深度学习TIL评分算法很少。

我们利用Lizard数据集中的H&E染色图像和淋巴细胞标注,开发自动化多尺度LinkNet流程,在细胞水平定量CRC肿瘤中的TIL。采用两个国际数据集评估自动TIL评分(TILsLink)对疾病进展和总生存期(OS)的预测性能:癌症基因组图谱(TCGA)中的554例CRC患者,以及分子与细胞肿瘤学(MCO)中的1,130例CRC患者。

LinkNet模型表现出优异的精确率(0.9508)、召回率(0.9185)和总体F1分数(0.9347)。在TCGA和MCO两个队列中,TILsLink与疾病进展或死亡风险之间均呈现清晰的连续性关联。TCGA数据的单变量和多变量Cox回归分析均显示,TIL丰度高的患者疾病进展风险显著降低(约75%)。在MCO和TCGA两个队列中,单变量分析均显示TIL高组与OS改善显著相关,风险分别降低30%和54%。在依据已知风险因素划分的不同亚组中,TIL水平高的有利影响均保持一致。

基于LinkNet的自动TIL定量深度学习流程可成为CRC的实用工具。TILsLink可能是疾病进展的独立风险因素,其所含疾病进展预测信息超越了现有临床风险因素和生物标志物。TILsLink对OS也具有明显的预后意义。

展开英文摘要原文

Tumor-infiltrating lymphocytes (TILs) have a significant prognostic value in cancers. However, very few automated, deep learning-based TIL scoring algorithms have been developed for colorectal cancer (CRC).

We developed an automated, multiscale LinkNet workflow for quantifying TILs at the cellular level in CRC tumors using H&E-stained images from the Lizard data set with annotations of lymphocytes. The predictive performance of the automatic TIL scores ( T I L s L i n k ) for disease progression and overall survival (OS) was evaluated using two international data sets, including 554 patients with CRC from The Cancer Genome Atlas (TCGA) and 1,130 patients with CRC from Molecular and Cellular Oncology (MCO).

The LinkNet model provided outstanding precision (0.9508), recall (0.9185), and overall F1 score (0.9347). Clear continuous TIL-hazard relationships were observed between T I L s L i n k and the risk of disease progression or death in both TCGA and MCO cohorts. Both univariate and multivariate Cox regression analyses for the TCGA data demonstrated that patients with high TIL abundance had a significant (approximately 75%) reduction in risk for disease progression. In both the MCO and TCGA cohorts, the TIL-high group was significantly associated with improved OS in univariate analysis (30% and 54% reduction in risk, respectively). The favorable effects of high TIL levels were consistently observed in different subgroups (classified according to known risk factors).

The proposed deep-learning workflow for automatic TIL quantification on the basis of LinkNet can be a useful tool for CRC. T I L s L i n k is likely an independent risk factor for disease progression and carries predictive information of disease progression beyond the current clinical risk factors and biomarkers. The prognostic significance of T I L s L i n k for OS is also evident.

论文信息

作者
Liu A、Li X、Wu H、Guo B、Jonnagaddala J、Zhang H、Xu S
第一作者单位
Department of Statistics and Finance, School of Management, University of Science and Technology of China, Hefei, Anhui, China.China
通讯作者单位
Clinical Pharmacology and Quantitative Science, Genmab Inc, Princeton, NJ.
文献类型
非美国政府资助研究
期刊
JCO precision oncology2023 Feb
原文标识
PubMed 36848612 · DOI 10.1200/PO.22.00522