← 返回

使用多实例学习对组织病理学图像进行三阴性乳腺癌的生存预测

英文原题:Survival prediction in triple negative breast cancer using multiple instance learning of histopathological images.

查看英文原题

Survival prediction in triple negative breast cancer using multiple instance learning of histopathological images.

PubMed 2022/08/25(内容时间) Sci Rep Q1 · IF 4.9(JCR 2025)

分数与星级只用于站内排序 —— 不代表疗效、安全性或个人适用性。

中文摘要

计算病理学是一个迅速扩展的研究领域,因为当前全球组织病理学正通过采用数字化工作流程而发生转变。乳腺癌患者的生存预测是一项重要任务,目前依赖于对癌症形态学特征、免疫组织化学生物标志物表达和患者临床发现的组织病理学评估。为了促进生存风险预测的人工流程,我们开发了一个计算病理学框架,用于使用临床侵袭性三阴性乳腺癌的数字化扫描苏木精和伊红染色组织微阵列图像进行生存预测。

我们的结果表明,该模型可以产生平均一致性指数0.616。我们的模型预测在单变量分析(风险比 = 3.12,95%置信区间[1.69,5.75],p < 0.005)和使用临床病理数据的多变量分析(风险比 = 2.68,95%置信区间[1.44,4.99],p < 0.005)中进行了独立预后意义的分析。通过对我们模型生成的热图进行定性分析,一位专家病理学家能够将高风险预测的注意力热图中突出显示的组织特征与与更具侵袭性行为相关的形态学特征联系起来,例如低水平的TIL(肿瘤浸润淋巴细胞)、富含基质的组织和高分级浸润性癌,从而为我们的方法在三阴性乳腺癌中提供可解释性。

展开英文摘要原文

Computational pathology is a rapidly expanding area for research due to the current global transformation of histopathology through the adoption of digital workflows. Survival prediction of breast cancer patients is an important task that currently depends on histopathology assessment of cancer morphological features, immunohistochemical biomarker expression and patient clinical findings.

To facilitate the manual process of survival risk prediction, we developed a computational pathology framework for survival prediction using digitally scanned haematoxylin and eosin-stained tissue microarray images of clinically aggressive triple negative breast cancer.

Our results show that the model can produce an average concordance index of 0. 616.

Our model predictions are analysed for independent prognostic significance in univariate analysis (hazard ratio = 3. 12, 95% confidence interval [1. 69,5. 75], p < 0. 005) and multivariate analysis using clinicopathological data (hazard ratio = 2. 68, 95% confidence interval [1. 44,4. 99], p < 0. 005).

Through qualitative analysis of heatmaps generated from our model, an expert pathologist is able to associate tissue features highlighted in the attention heatmaps of high-risk predictions with morphological features associated with more aggressive behaviour such as low levels of tumour infiltrating lymphocytes, stroma rich tissues and high-grade invasive carcinoma, providing explainability of our method for triple negative breast cancer.

论文信息

作者
Sandarenu P、Millar EKA、Song Y、Browne L、Beretov J、Lynch J、Graham PH、Jonnagaddala J
第一作者单位
School of Computer Science and Engineering, UNSW Sydney, Kensington, NSW, 2052, Australia.Australia
通讯作者单位
School of Computer Science and Engineering, UNSW Sydney, Kensington, NSW, 2052, Australia. erik.meijering@unsw.edu.au.Australia
文献类型
非美国政府资助研究
期刊
Scientific reports2022 Aug 25
原文标识
PubMed 36008541 · DOI 10.1038/s41598-022-18647-1