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中国肺肉瘤样癌中 TMB、PD-L1 表达和 CD8(+) T 细胞浸润的基因组变异与免疫相关特征

英文原题:Genomic Variations and Immune-Related Features of TMB, PD-L1 Expression and CD8(+) T Cell Infiltration in Chinese Pulmonary Sarcomatoid Carcinoma.

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Genomic Variations and Immune-Related Features of TMB, PD-L1 Expression and CD8(+) T Cell Infiltration in Chinese Pulmonary Sarcomatoid Carcinoma.

PubMed 2022/04/20(内容时间) Int J Gen Med Q2 · IF 2.3(JCR 2025)

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研究概要

通过对遗传与免疫图谱的描绘,我们发现 PSC 各亚组之间存在异质性。

中文摘要

肺肉瘤样癌(PSC)是一种罕见且独特的肺癌亚型,具有侵袭性强、预后差等特点。然而,PSC患者的基因组图谱和免疫微环境尚未得到充分阐明。

本研究对38份独立PSC样本进行全外显子组测序(WES),描绘基因组图谱。肿瘤突变负荷(TMB)根据每兆碱基编码区内非同义单核苷酸变异(SNV)和插入缺失变异总数计算。通过免疫组化评估PSC样本中的PD-L1表达和CD8阳性T细胞密度,并分析其与最常见基因突变之间的关系。进一步比较携带高频突变基因者以及TMB、PD-L1和CD8阳性TIL表达高低不同患者的总生存期(OS),并按形态学和病理类型进行OS亚组分析,评估其与TMB、PD-L1和CD8阳性T细胞的相关性。

研究确定了PSC患者的基因组及体细胞突变特征。具有不同临床病理特征的亚组患者呈现不同基因突变和免疫学特征。此外,基因组特征影响临床结局,其中SARS突变与预后恶化相关。

通过绘制遗传和免疫图谱,研究发现PSC不同亚组之间存在异质性。研究结果可能为中国PSC患者发现治疗敏感性机会提供依据。

展开英文摘要原文

Pulmonary sarcomatoid carcinoma (PSC) is a rare and distinct subtype of lung cancer characterized by its aggressiveness and dismal prognosis. However, genomic landscape and immune contexture have not been fully elucidated among PSC patients.

In the present study, whole-exome-sequencing (WES) analyses were performed to depict genomic landscape of 38 independent PSC samples. Tumor mutation burden (TMB) was calculated with the total number of non-synonymous SNVs and indel variants per megabase of coding regions. PD-L1 expression and CD8 + T cell density were evaluated by immunohistochemistry in PSC samples. Their associations with genomic mutation were further assessed in genes with most frequent mutation. Overall survival (OS) of PSC patients with top mutated genes and high and low TMB, PD-L1 and CD8 + TIL expressions were further compared. Subgroup analyses of OS stratified by morphology and pathological type were conducted. Their correlation with TMB, PD-L1 and CD8 + T cell were further assessed.

We identified a cohort of genomic and somatic mutation in PSC patients. Subgroup patients with distinct clinicopathological features were found to harbor different genomic mutations and immunologic features. Besides, genomic profiles influenced outcomes, with SARS mutation associated with worsened prognosis.

Through the mapping of genetic and immunologic landscape, we find the heterogeneity among the subgroups of PSC. Our findings may provide opportunities for therapeutic susceptibility among Chinese PSC patients.

论文信息

作者
Zhang C、Li Z、Zhang Y、Zhao C、Wang H、Lin J、Liu C、Wang X
第一作者单位
Department of Integrated Therapy, Fudan University Shanghai Cancer Center, Shanghai Medical College, Shanghai, 200032, People's Republic of China.China
通讯作者单位
Department of Internal Medicine-Oncology, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, 250117, People's Republic of China.China
期刊
International journal of general medicine2022
原文标识
PubMed 35480996 · DOI 10.2147/IJGM.S357659