RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Combined Assessment of the Tumor-Stroma Ratio and Tumor Immune Cell Infiltrate for Immune Checkpoint Inhibitor Therapy Response Prediction in Colon Cancer.
Combined Assessment of the Tumor-Stroma Ratio and Tumor Immune Cell Infiltrate for Immune Checkpoint Inhibitor Therapy Response Prediction in Colon Cancer.
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目前用于预测免疫检查点抑制剂(ICI)治疗反应的最佳生物标志物策略未能考虑患者间缓解率的差异。组织学肿瘤-间质比(TSR)可量化肿瘤内间质含量,近期研究发现其可预测多种癌症类型对新辅助治疗的反应。
在本研究中,我们使用生物信息学方法预测了来自癌症基因组图谱的335例未经治疗的结肠腺癌肿瘤对ICI治疗产生反应的可能性。TSR在诊断组织切片上进行评分,肿瘤浸润免疫细胞(TIIC)从转录组数据中推断。间质含量高的肿瘤表现出T调节细胞浸润增加(p = 0.014),但未能预测ICI治疗反应。
因此,我们基于组织学间质含量和转录组去卷积免疫细胞浸润,设计了一种包含四种间质类别的混合肿瘤微环境分类,该分类与先前建立的用于ICI治疗反应的转录组和基因组生物标志物相关。通过整合这些生物标志物,间质低/免疫高的肿瘤被预测为对ICI治疗最有可能产生反应。本文描述的框架为扩展当前组织学TIIC定量分析提供了证据,将TSR作为一种新型、易于使用的生物标志物纳入其中,用于预测ICI治疗反应。
The best current biomarker strategies for predicting response to immune checkpoint inhibitor (ICI) therapy fail to account for interpatient variability in response rates. The histologic tumor-stroma ratio (TSR) quantifies intratumoral stromal content and was recently found to be predictive of response to neoadjuvant therapy in multiple cancer types. In the current work, we predicted the likelihood of ICI therapy responsivity of 335 therapy-naive colon adenocarcinoma tumors from The Cancer Genome Atlas, using bioinformatics approaches. The TSR was scored on diagnostic tissue slides, and tumor-infiltrating immune cells (TIICs) were inferred from transcriptomic data. Tumors with high stromal content demonstrated increased T regulatory cell infiltration ( p = 0.
014) but failed to predict ICI therapy response. Consequently, we devised a hybrid tumor microenvironment classification of four stromal categories, based on histological stromal content and transcriptomic-deconvoluted immune cell infiltration, which was associated with previously established transcriptomic and genomic biomarkers for ICI therapy response.
By integrating these biomarkers, stroma-low/immune-high tumors were predicted to be most responsive to ICI therapy. The framework described here provides evidence for expansion of current histological TIIC quantification to include the TSR as a novel, easy-to-use biomarker for the prediction of ICI therapy response.
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