RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Expression profile of GSDMB in oral squamous cell carcinoma and its impact on tumor immune microenvironment and prognosis.
Expression profile of GSDMB in oral squamous cell carcinoma and its impact on tumor immune microenvironment and prognosis.
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GSDMB 可能在 OSCC 的发生发展中发挥关键作用,并且通过计算机药物敏感性分析与 TMB、免疫微环境和药物反应预测密切相关。其表达不仅影响肿瘤免疫反应,还有潜力作为 OSCC 的生物标志物和治疗靶点。本研究为 GSDMB 在 OSCC 中的功能作用及其作为预后标志物的临床应用提供了新的见解。
口腔鳞状细胞癌(OSCC)是全球范围内头颈部最常见的恶性肿瘤之一,其发生发展受基因突变、免疫微环境等多种因素影响。尽管目前已有多种治疗手段,但耐药、复发等问题仍然存在。Gasdermin B(GSDMB)基因编码的蛋白Gasdermin B在多种癌症中表现出复杂的生物学功能,尤其在细胞死亡和免疫反应中发挥重要作用。然而,GSDMB在OSCC中的作用尚不明确。因此,本研究旨在探讨GSDMB在OSCC中的表达特征及其潜在的生物学功能。
本研究采用生物信息学方法,基于多组学数据分析了GSDMB在OSCC中的表达图谱。首先,我们分析了GSDMB在泛癌类型中的表达,并根据中位表达值将OSCC样本分为高表达组和低表达组。随后,探讨了这两组在肿瘤突变负荷(TMB)、免疫微环境、计算机药物敏感性分析和预后方面的差异。此外,利用单细胞RNA测序(scRNA-seq)和空间转录组学数据(stRNA-seq)分析了GSDMB在不同细胞类型中的表达特征。为进一步支持计算预测,在SCC25细胞中进行了有或无GSDMB敲低的体外5-氟尿嘧啶(5-FU)敏感性实验。
GSDMB在OSCC肿瘤组织中的表达显著高于正常组织,且在肿瘤分级、年龄组和N分期之间观察到显著差异。高表达组的TMB显著高于低表达组,显示GSDMB表达水平与TMB呈正相关。生存分析显示,高TMB组患者的生存率显著低于低TMB组,而高GSDMB表达与较差预后相关。免疫景观分析表明,高表达组中CD8+ T细胞和NK 细胞的浸润水平较高,同时抗原呈递、细胞毒活性和免疫检查点活性等免疫功能增强。计算机药物敏感性分析提示,GSDMB高表达的患者可能对多种抗癌药物更敏感。一致地,在SCC25细胞中,GSDMB敲低显著增加了5-FU的IC50,表明GSDMB缺失后化疗敏感性降低。此外,scRNA-seq分析揭示了GSDMB在不同免疫细胞群体中的差异表达,提示其在肿瘤免疫微环境中可能具有重要意义。
Oral squamous cell carcinoma (OSCC) is one of the most common malignant tumors of the head and neck region worldwide, with its development influenced by a multitude of factors such as genetic mutations and the immune microenvironment. Despite the availability of current treatment options, issues like drug resistance and recurrence persist. The Gasdermin B (GSDMB) gene encodes the protein Gasdermin B which exhibits complex biological functions in various cancers, notably playing a significant role in cell death and immune responses. However, the role of GSDMB in OSCC remains unclear. Therefore, this study aims to investigate the expression profile of GSDMB in OSCC and its potential biological functions.
This study employs a bioinformatics approach to analyze the expression landscape of GSDMB in OSCC based on multi-omics data. Initially, we analyzed the expression of GSDMB across pan-cancer types and categorized OSCC samples into high and low-expression groups according to the median expression value. Subsequently, differences between these two groups concerning tumor mutation burden (TMB), immune microenvironment, in silico drug sensitivity analysis, and prognosis were explored. Additionally, single-cell RNA sequencing (scRNA-seq) and spatial transcriptomics data (stRNA-seq) were utilized to analyze the expression characteristics of GSDMB across different cell types. To further support the computational prediction, in vitro 5-fluorouracil (5-FU) sensitivity assays were performed in SCC25 cells with or without GSDMB knockdown.
The expression of GSDMB was significantly higher in OSCC tumor tissues compared to normal tissues, with significant differences observed across tumor grades, age groups, and N stages. The TMB was significantly higher in the high-expression group than in the low-expression group, showing a positive correlation between GSDMB expression levels and TMB. Survival analysis revealed that patients in the high-TMB group had significantly lower survival rates compared to those in the low-TMB group, while high GSDMB expression correlated with poorer prognosis. Immune landscape analysis indicated higher infiltration levels of CD8+ T cells and natural killer cells in the high-expression group, along with enhanced immune functions such as antigen presentation, cytotoxic activity, and immune checkpoint activity. In silico drug sensitivity analysis suggested that patients with high GSDMB expression may be more responsive to multiple anticancer agents. Consistently, in SCC25 cells, GSDMB knockdown significantly increased the IC50 of 5-FU, indicating reduced chemosensitivity upon GSDMB depletion. Furthermore, scRNA-seq analysis uncovered differential expression of GSDMB among distinct immune cell populations, suggesting its potential significance in the tumor immune microenvironment.
GSDMB may play a crucial role in the development of OSCC and is closely associated with TMB, the immune microenvironment, and drug response prediction by in silico drug sensitivity analysis. Its expression not only influences the tumor immune response but also has the potential to serve as a biomarker and therapeutic target for OSCC. This study provides novel insights into the functional role of GSDMB in OSCC and its clinical application as a prognostic marker.
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