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NK 细胞相关基因特征预测膀胱癌的免疫细胞浸润与生存改善

英文原题:Natural killer cell-related gene signature predicts immune cell infiltration and improved survival in bladder cancer.

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Natural killer cell-related gene signature predicts immune cell infiltration and improved survival in bladder cancer.

PubMed 2025/12/02(内容时间) Cytokine Q2 · IF 3.6(JCR 2025)

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研究概要

NK 细胞相关基因特征可作为 BC 中稳健的预后生物标志物和免疫治疗疗效预测因子。这些发现为 BC 生物学提供了新见解,并有助于个体化免疫治疗策略。

研究思路结论见上方概要

自然杀伤(NK)细胞疗法是一种有前景的癌症免疫治疗方法。本研究旨在识别和评估膀胱癌(BC)中NK细胞相关基因的预后意义。

利用癌症基因组图谱(TCGA)BLCA队列的RNA-seq数据,构建了NK细胞相关基因特征,并通过多因素Cox回归进行验证。进行功能富集分析(GO和KEGG)以探索相关的生物学过程。使用ESTIMATE和CIBERSORT算法评估免疫浸润状态。进行免疫组织化学(IHC)和多重免疫荧光(mIF)以在蛋白质水平验证关键发现。

建立了基于NK细胞相关基因的八基因预后特征,能够将BC患者分为高风险组和低风险组。高风险组患者的总生存期(OS)和无进展生存期(PFS)显著较差。多因素分析证实该特征独立于其他临床变量。该特征还与不同的免疫浸润模式相关,包括CD8 + T细胞、CD4 + 活化记忆T细胞、滤泡辅助T细胞、调节性T细胞、活化NK细胞、活化树突状细胞以及M0/M2巨噬细胞。值得注意的是,关键特征基因RAC3被发现在一部分肿瘤中高表达。这种RAC3表达升高与增殖增强(Ki67增加)以及CD8 + T细胞和CD56 + NK细胞浸润减少相关,表明存在免疫抑制微环境。与此一致的是,高风险组的TIDE评分显著更低,提示对免疫治疗的潜在反应性增强。

展开英文摘要原文

Natural killer (NK) cell-based therapies represent a promising immunotherapeutic approach for cancer treatment. This study aims to identify and evaluate the prognostic significance of NK cell-related genes in bladder cancer (BC).

Using RNA-seq data from The Cancer Genome Atlas (TCGA) BLCA cohort, an NK cell-related gene signature was constructed and validated via multivariate Cox regression. Functional enrichment analyses (GO and KEGG) were conducted to explore associated biological processes. Immune infiltration states were assessed using ESTIMATE and CIBERSORT algorithms. Immunohistochemistry (IHC) and multiplex immunofluorescence (mIF) were performed to validate key findings at the protein level.

An eight-gene prognostic signature based on NK cell-related genes was established, enabling stratification of BC patients into high- and low-risk groups. Patients in the high-risk group exhibited significantly worse overall survival (OS) and progression-free survival (PFS). Multivariate analysis confirmed the signature's independence from other clinical variables. The signature was also correlated with distinct immune infiltration patterns, including CD8 + T cells, CD4 + activated memory T cells, follicular helper T cells, regulatory T cells, activated NK cells, activated dendritic cells, and M0/M2 macrophages. Notably, the key signature gene RAC3 was found to be highly expressed in a subset of tumors. This elevated RAC3 expression was associated with enhanced proliferation (increased Ki67) and reduced infiltration of CD8 + T cells and CD56 + NK cells, indicating an immunosuppressive microenvironment. Consistently, the TIDE score was significantly lower in the high-risk group, suggesting enhanced potential responsiveness to immunotherapy.

The NK cell-related gene signature serves as a robust prognostic biomarker and predictor of immunotherapeutic efficacy in BC. These findings provide new insights into BC biology and facilitate personalized immunotherapy strategies.

论文信息

作者
Huang Y、Gong C、Yang E、Yuan H、Lv D、Yang C、Chen W、Wan Q
第一作者单位
Department of Urology, The Second Affiliated Hospital of Kunming Medical University, No. 374 Dianmian Street, Wuhua District, Kunming 650101, Yunnan, China.China
通讯作者单位
Department of Urology, The Second Affiliated Hospital of Kunming Medical University, No. 374 Dianmian Street, Wuhua District, Kunming 650101, Yunnan, China; Department of Urology, Peking University Shenzhen Hospital, Shenzhen 518036, Guangdong, China. Electronic address: lisenmao@kmmu.edu.cn.China
期刊
Cytokine2026 Jan
原文标识
PubMed 41337795 · DOI 10.1016/j.cyto.2025.157084