← 返回

DLGAP5 作为肺腺癌生物标志物的生物信息学分析:对免疫浸润和靶向治疗的意义

英文原题:Bioinformatics analysis of DLGAP5 as a biomarker in lung adenocarcinoma: implications for immune infiltration and targeted therapy.

查看英文原题

Bioinformatics analysis of DLGAP5 as a biomarker in lung adenocarcinoma: implications for immune infiltration and targeted therapy.

PubMed 2025/12/01(内容时间) Discov Oncol Q3 · IF 2.8(JCR 2025)

分数与星级只用于站内排序 —— 不代表疗效、安全性或个人适用性。

研究概要

DLGAP5 在肺腺癌(LUAD)中通常呈现高表达水平,这与关键驱动基因突变、较差的预后以及免疫浸润通路的富集相关。此外,DLGAP5 水平升高与免疫检查点阻断相关基因表达增加有关。这表明 DLGAP5 可能通过调节肿瘤微环境和塑造潜在免疫治疗靶点来影响患者结局。因此,DLGAP5 有望成为预测 LUAD 预后和评估免疫治疗疗效的新型分子生物标志物。

研究思路结论见上方概要

肺癌是全球癌症相关死亡的主要原因之一,其早期症状缺乏且缺乏有效的筛查工具,导致许多患者确诊时已处于晚期,显著降低了五年生存率。因此,本研究旨在寻找用于肺腺癌(LUAD)早期检测的新型分子生物标志物,并评估受影响患者的预后结局。

我们从GEO数据库中提取了与肺腺癌(LUAD)相关的三个数据集(GSE140797、GSE43458、GSE31210)中的差异表达基因,并对其进行交集筛选,最终鉴定出402个基因。随后,通过Cytoscape分析鉴定出15个具有重要意义的枢纽基因。进一步,在TCGA数据库中对这15个基因进行COX回归分析,最终筛选出与预后相关的关键基因DLGAP5。基于TIMER、GEPIA和TCGA数据库的结果,我们发现DLGAP5在LUAD患者中呈高表达水平。利用TCGA数据库中关于DLGAP5表达水平的数据,我们将肿瘤患者分为高表达和低表达两组。随后,我们进行了生存分析和TNM分期评估,以探究DLGAP5与患者预后及临床肿瘤分类之间的关系。同时,通过GO和KEGG富集分析评估了DLGAP5在LUAD患者中的具体生物学功能。此外,采用ESTIMATE、CIBERSORT和ssGSEA方法评估了LUAD患者的肿瘤免疫浸润情况。最后,我们分析了DLGAP5表达与免疫检查点、肿瘤突变负荷(TMB)及药物敏感性之间的关系,并对其预后价值进行了最终评估。

在肺腺癌(LUAD)中,DLGAP5的表达显著增加,且与更差的预后相关。其表达与TH2细胞和自然杀伤(NK)细胞呈强正相关,而与B细胞、树突状细胞和肥大细胞呈负相关。此外,DLGAP5高表达与细胞周期、p53信号通路和叶酸生物合成通路相关,而其低表达与神经活性配体-受体相互作用、胰腺分泌、细胞色素P450对外源药物的代谢、胆汁分泌和花生四烯酸代谢通路相关。同时,本研究还发现多种重要免疫检查点与DLGAP5的表达呈显著正相关,肿瘤突变负荷指数更高,且DLGAP5低表达者的IC50值呈上升趋势。

展开英文摘要原文

Lung cancer is a leading cause of cancer-related deaths globally, and its lack of early symptoms and lack of effective screening tools result in many patients being diagnosed at a late stage, which significantly reduces the five-year survival rate. Consequently, this research sought to identify novel molecular biomarkers for the early detection of lung adenocarcinoma (LUAD) and to evaluate the prognostic outcomes for affected patients. METHOD: We extracted differentially expressed genes from three datasets (GSE140797, GSE43458, GSE31210) associated with lung adenocarcinoma (LUAD) from the GEO database and screened them for intersections, resulting in the identification of 402 genes. Subsequently, 15 hub genes of significance were identified using Cytoscape analysis. Further, COX regression analysis was performed on these 15 genes in the TCGA database, and the key gene DLGAP5, associated with prognosis, was finally screened out. Based on the TIMER, GEPIA, and TCGA database results, we found that DLGAP5 showed a high expression level in LUAD patients. Utilizing data from the TCGA database regarding DLGAP5 expression levels, we categorized tumor patients into two groups: those with high and those with low expression. We then conducted survival analyses and assessments of TNM staging to investigate the connection between DLGAP5, patient prognosis, and clinical tumor classification. Meanwhile, the specific biological functions of DLGAP5 in LUAD patients were assessed by GO and KEGG enrichment analysis. In addition, ESTIMATE, CIBERSORT, and ssGSEA methods were used to assess the tumor immune infiltration in LUAD patients. Finally, we analyzed the relationship between DLGAP5 expression and immune checkpoints, tumor mutational load (TMB), and drug sensitivity, and provided a final assessment of its prognostic value. RESULT: In lung adenocarcinoma (LUAD), there was a notable increase in the expression of DLGAP5, which correlated with a worse prognosis. The expression exhibited a strong positive relationship with TH2 cells and natural killer (NK) cells while showing a negative relationship with B cells, dendritic cells, and mast cells. In addition, high expression of DLGAP5 was associated with the cell cycle, p53 signaling pathway, and folate biosynthesis pathway, whereas its low expression was associated with neuroactive ligand-receptor interactions, pancreatic secretion, exogenous drug metabolism by cytochrome P450, bile secretion, and arachidonic acid metabolism pathway. Meanwhile, this study also found that a variety of important immune checkpoints were significantly and positively correlated with the expression of DLGAP5, a higher tumor mutation load index, and the IC50 values of those with low DLGAP5 expression showed an increasing trend.

DLGAP5 exhibits generally high expression levels in lung adenocarcinoma (LUAD), which is associated with mutations in key driver genes, poorer prognosis, and enrichment with immune infiltration pathways. Moreover, the elevated levels of DLGAP5 were linked to the increased expression of genes related to immune checkpoint blockade. This suggests that DLGAP5 may influence patient outcomes by modulating the tumor microenvironment and shaping potential immunotherapy targets. Therefore, DLGAP5 is expected to be a novel molecular biomarker for predicting the prognosis of LUAD and evaluating the efficacy of immunotherapy.

论文信息

作者
Jiao L、Xu X、Liu Y、Li F、Li C、Wu T
第一作者单位
Department of Respiratory and Critical Care Medicine, Affiliated Hospital of Yangzhou University, Yangzhou, China.China
通讯作者单位
Department of Thoracic Surgery, Affiliated Hospital of Yangzhou University, Yangzhou, China. 092455@yzu.edu.cn.China
期刊
Discover oncology2025 Dec 1
原文标识
PubMed 41326883 · DOI 10.1007/s12672-025-04145-z