← 返回

网络药理学与转录组分析揭示人参皂苷 CK 重塑肿瘤免疫微环境抑制肝癌进展的机制

英文原题:Network Pharmacology and Transcriptomic Analysis Reveal the Mechanism by Which Ginsenoside CK Remodels the Tumor Immune Microenvironment to Inhibit Liver Cancer Progression.

查看英文原题

Network Pharmacology and Transcriptomic Analysis Reveal the Mechanism by Which Ginsenoside CK Remodels the Tumor Immune Microenvironment to Inhibit Liver Cancer Progression.

PubMed 2025/11/01(内容时间) Chem Biol Drug Des Q3 · IF 3.3(JCR 2025)

分数与星级只用于站内排序 —— 不代表疗效、安全性或个人适用性。

中文摘要

本研究旨在探讨人参皂苷CK下调EZH2激活树突状细胞-NK细胞轴,促进肝细胞癌(HCC)抗肿瘤免疫的机制。利用网络药理学识别人参皂苷CK治疗HCC的潜在靶点,随后进行蛋白质-蛋白质相互作用(PPI)网络分析以及GO和KEGG功能富集分析。对来自GEO数据库(GSE84005)的HCC相关转录组数据进行差异表达分析以识别关键基因。利用GEPIA和Kaplan-Meier Plotter数据库验证关键基因的表达及预后相关性。采用分子对接技术研究人参皂苷CK与关键靶点的结合特征。

进一步根据EZH2表达对肝癌样本进行分组,筛选共表达基因并进行功能注释。利用ssGSEA算法分析关键基因表达与免疫细胞浸润之间的相关性。培养人HCC细胞系MHCC97和Hep3B,利用CCK-8和集落形成实验评估细胞增殖和集落形成。Transwell迁移和侵袭实验评估细胞迁移和侵袭的变化。采用流式细胞术分析细胞凋亡和细胞周期分布。建立异种移植小鼠模型以监测肿瘤体积和体重变化。采用免疫组织化学评估肿瘤组织中Ki67的表达,流式细胞术测量肿瘤组织中NK细胞和树突状细胞的比例。进行qRT-PCR和Western blotting评估相关因子的表达水平。网络药理学分析鉴定了人参皂苷CK的114个潜在靶点和HCC的3991个潜在靶点,其中83个为交集靶点。GO和KEGG分析表明,这些靶点参与磷脂酰肌醇介导的信号传导、上皮细胞增殖和迁移以及MAP激酶活性的调控,提示在HCC中通过多种免疫相关信号通路进行调控。

转录组分析显示,核心靶点EZH2在HCC中高表达,且高表达与较差的总生存期和无复发生存期相关。分子对接证实人参皂苷CK稳定结合于EZH2的活性位点(结合能:-9.1 kcal/mol)。共表达分析显示EZH2与细胞周期、p53通路及转录因子E2F8/MYBL2密切相关。免疫浸润分析表明EZH2负向调控树突状细胞-NK细胞轴,促进肿瘤免疫微环境重塑。体外实验证明人参皂苷CK下调EZH2,抑制HCC细胞增殖、迁移和侵袭,而EZH2过表达逆转了这些抑制作用。体内实验证实人参皂苷CK通过下调EZH2、激活树突状细胞-NK细胞轴并重塑肿瘤免疫微环境来抑制肿瘤形成。人参皂苷CK抑制EZH2,激活树突状细胞-NK细胞轴并重塑肿瘤免疫微环境,从而抑制HCC细胞活性和致瘤性。

展开英文摘要原文

The study aimed to investigate the mechanism by which ginsenoside CK downregulates EZH2 to activate the dendritic cell-NK cell axis, promoting antitumor immunity in hepatocellular carcinoma (HCC). Potential targets of ginsenoside CK for HCC treatment were identified utilizing network pharmacology, followed by protein-protein interaction (PPI) network analysis, and GO and KEGG functional enrichment analyses. Differential expression analysis of HCC-related transcriptomic data from the GEO database (GSE84005) was conducted to identify key genes. The expression and prognostic relevance of key genes were verified utilizing the GEPIA and Kaplan-Meier Plotter databases. Molecular docking technology was used to study the binding characteristics of ginsenoside CK to key targets. The liver cancer samples were further grouped according to EZH2 expression, and co-expressed genes were screened and functionally annotated. The correlation between key gene expression and immune cell infiltration was analyzed utilizing the ssGSEA algorithm. Human HCC cell lines MHCC97 and Hep3B were cultured, and cell proliferation and colony formation were assessed utilizing CCK-8 and colony formation assays. Transwell migration and invasion assays evaluated changes in cell migration and invasion. Flow cytometry was employed to analyze cell apoptosis and cell cycle distribution. A xenograft mouse model was established to monitor tumor volume and body weight changes. Immunohistochemistry was used to assess Ki67 expression in tumor tissues, and flow cytometry measured the proportions of NK cells and dendritic cells in tumor tissues.

qRT-PCR and Western blotting were performed to evaluate the expression levels of related factors. Network pharmacology analysis identified 114 potential targets of ginsenoside CK and 3991 potential targets of HCC, with 83 intersecting targets. GO and KEGG analyses indicated these targets were involved in phosphatidylinositol-mediated signaling, epithelial cell proliferation and migration, and regulation of MAP kinase activity, suggesting regulation through multiple immune-related signaling pathways in HCC. Transcriptomic analysis revealed that the core target EZH2 was highly expressed in HCC, and high expression correlated with poorer overall survival and relapse-free survival. Molecular docking confirmed that ginsenoside CK was stably bound to the active site of EZH2 (binding energy: -9. 1 kcal/mol).

Co-expression analysis showed that EZH2 was closely related to the cell cycle, p53 pathway and transcription factor E2F8/MYBL2. Immune infiltration analysis indicated that EZH2 negatively regulated the dendritic cell-NK cell axis, contributing to the remodeling of the tumor immune microenvironment. In vitro experiments demonstrated that ginsenoside CK downregulated EZH2, inhibiting HCC cell proliferation, migration, and invasion, while EZH2 overexpression reversed these inhibitory effects.

In vivo experiments confirmed that ginsenoside CK suppressed tumor formation by downregulating EZH2, activating the dendritic cell-NK cell axis, and remodeling the tumor immune microenvironment. Ginsenoside CK inhibits EZH2, activating the dendritic cell-NK cell axis and remodeling the tumor immune microenvironment, thereby suppressing HCC cell activity and tumorigenicity.

论文信息

作者
Ye F、Wang Y、Du Q、Sun B、Zhang M、Guo J
单位
Department of Hepatobiliary Surgery, Shandong Provincial Third Hospital, Shandong University, Jinan, P. R. China.China
期刊
Chemical biology & drug design2025 Nov
原文标识
PubMed 41293954 · DOI 10.1111/cbdd.70204