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基于基因特征的急性髓系白血病预后模型:BATF、EGR1、PD-1、PD-L1 和 TIM-3 的作用

英文原题:Gene Signature-Based Prognostic Model for Acute Myeloid Leukemia: The Role of BATF, EGR1, PD-1, PD-L1, and TIM-3.

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Gene Signature-Based Prognostic Model for Acute Myeloid Leukemia: The Role of BATF, EGR1, PD-1, PD-L1, and TIM-3.

PubMed 2025/03/19(内容时间) Int J Med Sci Q1 · IF 3.7(JCR 2025)

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中文摘要

急性髓系白血病(AML)是一种造血干/祖细胞恶性肿瘤,T细胞耗竭与不良结局相关。既往研究显示,碱性亮氨酸拉链ATF样转录因子(BATF)和早期生长反应因子1(EGR1)参与AML肿瘤清除过程中CAR-T 细胞耗竭,但二者在AML预后中的作用及其与免疫检查点基因的关系尚未充分研究。

分析本中心92例初诊AML患者骨髓样本(JUN数据集)中的BATF、EGR1、程序性细胞死亡蛋白1(PD-1)、程序性死亡配体1(PD-L1)及T细胞免疫球蛋白和黏蛋白结构域蛋白3(TIM3)表达,并评估预后。另使用TCGA数据库155例和Beat-AML数据库199例患者的RNA测序数据进行验证。

BATF高表达与较差总生存期(OS)相关(P=.030),EGR1高表达则提示预后较好(P=.040)。BATF高表达且EGR1低表达患者结局最差(P<.001)。在接受异基因造血干细胞移植(allo-HSCT)的患者中,BATF高表达与较短OS相关(P=.004)。结合BATF、EGR1、PD-1、PD-L1和TIM-3构建的预后模型可计算风险评分;在全体AML患者及allo-HSCT受者中,高危患者OS均显著短于低危患者(P<.001)。TCGA和Beat-AML数据集也得到相似结果。

本研究建立了基于BATF、EGR1、PD-1、PD-L1和TIM-3表达的预后模型,可有效预测AML患者及allo-HSCT受者的生存结局,有望为预后评估和治疗策略提供参考。

展开英文摘要原文

Background: Acute myeloid leukemia (AML) is a malignancy of hematopoietic stem and progenitor cells, with T cell exhaustion linked to poor outcomes.

Our previous research has shown that basic leucine zipper ATF-like transcription factor ( BATF ) and early growth response 1 ( EGR1 ) play a role in chimeric antigen receptor T (CAR-T) cell exhaustion during AML tumor elimination.

However, the roles of BATF and EGR1 and their association with immune checkpoint genes in AML prognosis remain underexplored. Methods: Bone marrow (BM) samples from 92 newly diagnosed AML patients at our clinical center (JUN-dataset) were analyzed to detect the expression levels of BATF , EGR1 , programmed cell death 1 ( PD-1 ), programmed death-ligand 1 ( PD-L1 ), T cell immunoglobulin and mucin domain-containing protein 3 ( TIM3 ) together with conducting a prognostic assessment.

Our findings were validated using RNA sequencing data from 155 AML patients from the TCGA database and 199 AML patients from the Beat-AML database. Results: High BATF expression correlated with poor overall survival (OS) ( P = 0. 030), whereas high EGR1 expression indicated a favorable prognosis ( P = 0. 040). Patients with high BATF and low EGR1 expression had worst outcomes ( P < 0. 001). Among those receiving allogenic hematopoietic stem cell transplantation (allo-HSCT), high BATF expression was linked to shorter OS ( P = 0. 004).

Moreover, a prognostic model incorporating BATF , EGR1 , PD-1 , PD-L1 , and TIM-3 calculated a risk score, with high-risk patients demonstrating significantly shorter OS than low-risk patients in both total AML patients and allo-HSCT recipients ( P < 0. 001). Similar results were found in both the TCGA and Beat-AML datasets.

Conclusions: We establish a prognostic model based on BATF , EGR1 , PD-1 , PD-L1 , and TIM-3 expression that effectively predicts survival outcomes for AML patients and allo-HSCT recipients. This model may provide valuable insights for prognosis assessment and treatment strategies.

论文信息

作者
Zhang Y、Chen Z、Zheng J、Chen S、Zhong L、Chen J、Chen C、Sui S
单位
Key Laboratory for Regenerative Medicine of Ministry of Education, Institute of Hematology, School of Medicine, Jinan University, Guangzhou 510632, China.China
期刊
International journal of medical sciences2025
原文标识
PubMed 40225861 · DOI 10.7150/ijms.108527