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计算筛选天然化合物作为针对 TIGIT 的潜在免疫检查点抑制剂,癌症免疫治疗的新途径

英文原题:Computational screening for natural compounds as potential immune checkpoint inhibitors against TIGIT, a new avenue in cancer immunotherapy.

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Computational screening for natural compounds as potential immune checkpoint inhibitors against TIGIT, a new avenue in cancer immunotherapy.

PubMed 2025/03/31(内容时间) Mol Divers Q2 · IF 4.3(JCR 2025)

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中文摘要

TIGIT-PVR信号通路是肿瘤免疫逃逸的关键机制,使其成为癌症免疫治疗的一个有吸引力的靶点。尽管抗TIGIT抗体近期取得了进展,但基于单克隆抗体的治疗药物因其免疫原性和免疫相关副作用而面临重大挑战。

本研究提出了一条新路径,即利用天然化合物作为TIGIT的潜在小分子抑制剂,为癌症免疫治疗中抗体提供了一种可能的替代方案。通过结合基于结构的虚拟筛选、ADMET分析、分子对接和分子动力学模拟的综合计算机工作流程,鉴定出六种有前景的候选化合物,大多来源于细菌:Neomycin K、4'-Deoxybutirosin A、5-Glucosyl-neamine、S-11-A、12-carbamoylstreptothricin E acid和Zwittermicin A。这些候选化合物表现出良好的结合能、稳定的相互作用以及阻断TIGIT-PVR信号传导的能力。

这些化合物可能竞争性地与PVR争夺结合TIGIT,限制TIGIT-PVR复合物的形成,而该复合物通常激活T细胞和NK细胞中的抑制性级联反应,降低其抗肿瘤活性。通过破坏这一相互作用,所鉴定的化合物有潜力激发T细胞和NK细胞对癌细胞的应答。与传统抗体疗法相比,此类天然化合物可能提供更好的组织穿透性和更低的免疫原性。细菌来源化合物作为TIGIT抑制剂的发现,为研究微生物代谢物用于癌症免疫治疗提供了一个新方向。该策略不仅鉴定出一类新型TIGIT抑制剂,还提供了一个稳健的计算框架,用于发现和表征小分子免疫检查点抑制剂,为后续实验验证铺平了道路,以探索其在恢复抗肿瘤免疫应答和改善癌症患者临床结局方面的疗效。

展开英文摘要原文

The TIGIT-PVR signalling pathway is a key mechanism of tumour immune evasion, making it an attractive target for cancer immunotherapy. Despite the recent advances in anti-TIGIT antibodies, monoclonal antibody-based therapeutics present significant challenges because of their immunogenicity and immune-related side effects.

This study presents a new path involving natural compounds as potential small molecule inhibitors of TIGIT, providing a possible alternative to antibodies in cancer immunotherapy. Through a comprehensive in silico workflow combining structure-based virtual screening, ADMET analysis, Molecular docking and molecular dynamics simulations, six promising candidates, mostly of bacterial origin, were identified: Neomycin K, 4'-Deoxybutirosin A, 5-Glucosyl-neamine, S-11-A, 12-carbamoylstreptothricin E acid, and Zwittermicin A. These candidates demonstrated favourable binding energies, stable interactions, and the capacity to block TIGIT-PVR signalling. The compounds can potentially compete with PVR to bind to TIGIT, limiting the formation of the TIGIT-PVR complex, which typically activates an inhibitory cascade in T cells and NK cells, reducing their anti-tumour activity.

By disrupting this interaction, the identified compounds have the potential to stimulate T cell and NK cell responses against cancer cells. Such natural compounds potentially provide better tissue penetration and reduced immunogenicity compared to conventional antibody therapies. The discovery of bacterial-derived compounds as TIGIT inhibitors presents a new direction in the investigation of microbial metabolites for cancer immunotherapy.

This strategy not only identifies a new class of TIGIT inhibitors but also provides a robust computational framework for discovering and characterizing small molecule immune checkpoint inhibitors, paving the way for subsequent experimental validation to explore their efficacy in restoring anti-tumour immune responses and improving clinical outcomes for cancer patients.

论文信息

作者
Chakraborty A、Kumar A
第一作者单位
Department of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Simrol, 453552, India.India
通讯作者单位
Department of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Simrol, 453552, India. amitk@iiti.ac.in.India
期刊
Molecular diversity2026 Feb
原文标识
PubMed 40163147 · DOI 10.1007/s11030-025-11172-z