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TNFSF14 和 CD44 在胶质母细胞瘤中过表达,并与免疫抑制微环境相关

英文原题:TNFSF14 and CD44 are overexpressed in glioblastoma and associated with immunosuppressive microenvironment.

查看英文原题

TNFSF14 and CD44 are overexpressed in glioblastoma and associated with immunosuppressive microenvironment.

PubMed 2025/07/31(内容时间) Biomol Biomed Q3 · IF 2.8(JCR 2025)

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中文摘要

胶质母细胞瘤(GBM)是最致命的癌症之一,数十年来生存率一直很低。本研究旨在构建程序性死亡配体1(PD-L1)网络,识别其相互作用因子和过度代表的通路,并分析所识别基因与GBM免疫抑制微环境之间的关联。使用Cytoscape和相互作用基因/蛋白质检索工具(STRING)构建PD-L1网络。使用京都基因与基因组百科全书(KEGG)、通过进化关系进行蛋白质分析(Panther)和Reactome通路数据库(Reactome)在WebGestalt上进行过度代表分析。使用三个大型数据集(癌症基因组图谱(TCGA)、中国胶质瘤基因组图谱(CGGA)和Rembrandt)以及qPCR在计算机上检测基因表达水平。使用肿瘤免疫估计资源(TIMER 2.0)在线工具分析PD-L1基因表达与免疫细胞浸润之间的关联。发现分化簇44(CD44)和肿瘤坏死因子超家族成员14(TNFSF14)在GBM中与低级别胶质瘤(LGG)和正常脑组织相比显著过表达。它们的过表达与较差的总生存期相关,并表现出很强的区分GBM与参考脑组织的能力。

值得注意的是,CD44和TNFSF14与GBM的间充质亚型相关,并与调节性T细胞、静息自然杀伤(NK)细胞的存在和PD-L1表达呈正相关。

我们的发现突出了CD44和TNFSF14在GBM中的过表达及其在创建免疫抑制微环境中的潜在参与。揭示PD-L1相互作用网络及其相关通路,不仅有望识别GBM预后的新型生物标志物,还可能确定替代治疗靶点,这些靶点可能更有效地克服GBM治疗中固有的免疫抑制障碍。

展开英文摘要原文

Glioblastoma (GBM) is one of the deadliest cancers, and the survival rate has remained low for decades. The aim of the study was the construction of the programmed death-ligand 1 (PD-L1) network, identification of its interactors and over-represented pathways, and analysis of the association between the identified genes and the immunosuppressive microenvironment of GBM. The PD-L1 network was constructed using Cytoscape and Search Tool for the Retrieval of Interacting Genes/Proteins (STRING). Over-representation analysis was performed on WebGestalt using Kyoto Encyclopedia of Genes and Genomes (KEGG), Protein ANalysis THrough Evolutionary Relationships (Panther), and Reactome Pathway Database (Reactome).

Gene expression levels were examined in silico using three large datasets (The Cancer Genome Atlas (TCGA), Chinese Glioma Genome Atlas (CGGA), and Rembrandt), as well as with qPCR. The association between PD-L1 gene expression and immune cell infiltration was analyzed using the Tumor Immune Estimation Resource (TIMER 2. 0) online tool.

Cluster of differentiation 44 (CD44) and tumor necrosis factor superfamily member 14 (TNFSF14) were found to be significantly overexpressed in GBM compared to lower-grade glioma (LGG) and normal brain tissue. Their overexpression was associated with worse overall survival and demonstrated a strong ability to differentiate between GBM and reference brain tissue.

Notably, CD44 and TNFSF14 were linked to the mesenchymal subtype of GBM and positively correlated with the presence of regulatory T cells, resting natural killer (NK) cells, and PD-L1 expression.

Our findings highlight the overexpression of CD44 and TNFSF14 in GBM and their potential involvement in creating an immunosuppressive microenvironment. Unraveling the PD-L1 interaction network and its associated pathways offers the potential not only to identify novel biomarkers for GBM prognosis but also to pinpoint alternative therapeutic targets that could be more effective in overcoming the immunosuppressive hurdles inherent in GBM treatment.

论文信息

作者
Zottel A、Šamec N、Jovčevska I
单位
Centre for Functional Genomics and Bio-Chips, Institute of Biochemistry and Molecular Genetics, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia.Slovenia
期刊
Biomolecules & biomedicine2025 Jul 31
原文标识
PubMed 39977830 · DOI 10.17305/bb.2025.11791