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肺癌患者 PD-1 诱导肾毒性中外周血单个核细胞的单细胞 RNA 测序分析

英文原题:Single-cell RNA sequencing analysis of peripheral blood mononuclear cells in PD-1-induced renal toxicity in patients with lung cancer.

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Single-cell RNA sequencing analysis of peripheral blood mononuclear cells in PD-1-induced renal toxicity in patients with lung cancer.

PubMed 2024/09/14(内容时间) BMC Nephrol Q2 · IF 2.9(JCR 2025)

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研究概要

R-irAEs 与免疫细胞功能障碍相关。在 CD4+ T 细胞和 CD8+ T 细胞中鉴定出的 DEGs 及其富集通路在与抗 PD-1 治疗相关的肾脏 irAEs 发生发展中起重要作用。这些发现为抗 PD-1 治疗导致肾损伤的发病机制提供了新的视角。

研究思路结论见上方概要

尽管免疫检查点抑制剂(ICIs)提高了许多恶性肿瘤患者的生存率,但部分患者会出现各种免疫相关不良事件(irAEs)。irAEs 可影响多个器官系统,包括肾脏。在接受抗程序性细胞死亡蛋白 1(PD-1)治疗(pembrolizumab)时,与其他 irAEs 相比,肾脏相关不良事件相对少见。然而,AKI 的发生通常会导致抗 PD-1 治疗中断或停止。因此,迫切需要阐明肾脏 irAEs(R-irAEs)的机制,以促进早期管理。本研究旨在分析 R-irAEs 中外周血单个核细胞(PBMCs)的特征。

从3例接受抗PD-1治疗后发生R-irAEs的患者和3例未发生的患者中采集了PBMCs。对PBMCs进行scRNA-seq以识别细胞簇和差异表达基因(DEGs)。进行京都基因与基因组百科全书(KEGG)和基因本体论(GO)富集分析,以探究免疫细胞中最活跃的生物学过程。

在两组中共鉴定出15个细胞簇。FOS、RPS26和JUN是CD4+ T细胞中上调最显著的前三个基因。CD4+ T细胞中的DEGs富集于Th17分化、Th1和Th2细胞分化、NF-kappa B、Nod样受体、TNF、IL-17、凋亡以及NK细胞介导的细胞毒性信号通路。RPS26、TRBV25-1和JUN是CD8+ T细胞中上调最显著的前三个基因。CD8+ T细胞中的DEGs富集于Th17细胞分化、抗原加工与呈递、NK 细胞介导的细胞毒性、肠道IgA产生免疫网络、T细胞受体信号通路、Th1和Th2细胞分化、吞噬体以及细胞黏附分子。

展开英文摘要原文

Although the patient survival rate for many malignancies has been improved with immune checkpoint inhibitors (ICIs), some patients experience various immune-related adverse events (irAEs). IrAEs impact several organ systems, including the kidney. With anti-programmed cell death protein 1 (PD-1) therapy (pembrolizumab), kidney-related adverse events occur relatively rarely compared with other irAEs. However, the occurrence of AKI usually leads to anti-PD-1 therapy interruption or discontinuation. Therefore, there is an urgent need to clarify the mechanisms of renal irAEs (R-irAEs) to facilitate early management. This study aimed to analyse the characteristics of peripheral blood mononuclear cells (PBMCs) in R-irAEs.

PBMCs were collected from three patients who developed R-irAEs after anti-PD-1 therapy and three patients who did not. The PBMCs were subjected to scRNA-seq to identify cell clusters and differentially expressed genes (DEGs). Kyoto Encyclopedia of Genes and Genomes (KEGG) and gene ontology (GO) enrichment analyses were performed to investigate the most active biological processes in immune cells.

Fifteen cell clusters were identified across the two groups. FOS, RPS26, and JUN were the top three upregulated genes in CD4 + T cells. The DEGs in CD4 + T cells were enriched in Th17 differentiation, Th1 and Th2 cell differentiation, NF-kappa B, Nod-like receptor, TNF, IL-17, apoptosis, and NK cell-mediated cytotoxicity signaling pathways. RPS26, TRBV25-1, and JUN were the top three upregulated genes in CD8 + T cells. The DEGs in CD8 + T cells were enriched in Th17 cell differentiation, antigen processing and presentation, natural killer cell-mediated cytotoxicity, the intestinal immune network for IgA production, the T-cell receptor signalling pathway, Th1 and Th2 cell differentiation, the phagosome, and cell adhesion molecules.

In conclusion, R-irAEs are associated with immune cell dysfunction. DEGs and their enriched pathways identified in CD4 + T cells and CD8 + T cells play important roles in the development of renal irAEs related to anti-PD-1 therapy. These findings offer fresh perspectives on the pathogenesis of renal damage caused by anti-PD-1 therapy.

论文信息

作者
Liu S、Lu P、Yang B、Yang Y、Zhou H、Yang M
第一作者单位
Department of Nephrology, The Third Affiliated Hospital of Soochow University, Changzhou, 213003, China.China
通讯作者单位
Department of Nephrology, The Third Affiliated Hospital of Soochow University, Changzhou, 213003, China. yangmin1516@suda.edu.cn.China
期刊
BMC nephrology2024 Sep 14
原文标识
PubMed 39277735 · DOI 10.1186/s12882-024-03754-0