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缺氧相关特征用于对头颈部鳞状细胞癌患者进行风险分层以获益于免疫检查点抑制剂治疗:一项实验性研究

英文原题:Hypoxia-related signature to risk stratify patients for the benefit of immune checkpoint inhibitors therapy in head and neck squamous cell carcinoma: An experimental study.

查看英文原题

Hypoxia-related signature to risk stratify patients for the benefit of immune checkpoint inhibitors therapy in head and neck squamous cell carcinoma: An experimental study.

PubMed 2024/08/02(内容时间) Medicine (Baltimore) Q2 · IF 2(JCR 2025)

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研究概要

本研究开发并验证了一个 HAPGI 模型,该模型可被视为独立的预后生物标志物,并阐明了 HNSCC 的肿瘤免疫微环境。

研究思路结论见上方概要

越来越多的证据表明,缺氧是肿瘤增殖和转移的生物标志物。本研究旨在识别头颈部鳞状细胞癌(HNSCC)中的缺氧相关基因预后指数(HAGPI),并基于HAGPI定义的亚组来预测预后和对免疫检查点抑制剂治疗的反应。

从癌症基因组图谱(TCGA)下载了HNSCC患者的RNA测序转录组数据。进行蛋白质-蛋白质相互作用网络分析以筛选缺氧相关枢纽基因。采用单因素和多因素cox回归分析确定枢纽基因以构建HAGPI。随后将表达数据导入CIBERSORT以评估22种免疫细胞的相对比例,并比较2个HAGPI亚组之间免疫细胞的相对比例。在TCGA队列中验证了免疫表型评分(IPS)与HAGPI之间的关系,以评估免疫检查点抑制剂(ICIs)反应。

HAGPI 基于 HS3ST1、HK1、PGK1、STC2、SERPINE1、PKLR 基因构建。在高 HAGPI 患者中,TCGA 和 GEO 队列的主要终点事件和次要终点事件均显著低于低 HAGPI 组(P < .05)。HAGPI 高表达患者的预后比 HAGPI 低表达患者更差。高 HAGPI 中 M2 巨噬细胞和 NK 细胞丰度显著增强,而低 HAGPI 中调节性 T 细胞和 CD8 T 细胞显著升高。同时,低 HAGPI 患者的免疫抑制剂表达水平更高,侵袭性表型更少。此外,IPS 分析显示,IPS 更高的低 HAGPI 组代表更具免疫原性的表型。

展开英文摘要原文

Increasing evidence has shown that hypoxia is a biomarker of tumor proliferation and metastasis. This research aimed to identify a hypoxia-associated gene prognostic index (HAGPI) in head and neck squamous cell carcinoma (HNSCC) and based on HAGPI-defined subgroups to predict prognosis and response to immune checkpoint inhibitors therapy.

RNA-sequencing transcriptomic data for patients with HNSCC were downloaded from The Cancer Genome Atlas (TCGA). Protein-protein interaction network analysis was performed to select hypoxia-related hub genes. Univariate and multivariate cox regression analyses were used to identify hub genes to develop the HAGPI. Afterward expression data were imported into CIBERSORT to evaluate the relative proportion of 22 immune cells and compared the relative proportions of immune cells between the 2 HAGPI subgroups. The relationship between immunopheno score (IPS) and HAGPI was validated for immune checkpoint inhibitors (ICIs) response in TCGA cohorts.

The HAGPI was constructed based on HS3ST1, HK1, PGK1, STC2, SERPINE1, PKLR genes. In high-HAGPI patients, the primary and secondary endpoint events in TCGA and GEO cohorts were significantly lower than low-HAGPI groups (P < .05). HAGPI-high patients exhibited a poorer prognosis than HAGPI-low patients did. The abundance of M2 macrophages and NK cell were significantly enhanced in the high-HAGPI while T cells regulatory and T cells CD8, were markedly elevated in the low-HAGPI. Meanwhile, patients in the low-HAGPI patients had higher levels of immunosuppressant expression and less aggressive phenotypes. Furthermore, IPS analysis showed that the low-HAGPI group with higher IPS represented a more immunogenic phenotype.

The current study developed and verified a HAPGI model that can be considered as an independent prognostic biomarker and elucidated the tumor immune microenvironment of HNSCC.

论文信息

作者
Zhao Y、Yang Z、Fu M、Wu S、Wang M、Li J、Wang Z、Li W
第一作者单位
Department of Radiology, The First Hospital of Qinhuangdao, Qinhuangdao, Hebei, China.China
期刊
Medicine2024 Aug 2
原文标识
PubMed 39093745 · DOI 10.1097/MD.0000000000039184