RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Identification and validation of a lactate metabolism-related six-gene prognostic signature in intrahepatic cholangiocarcinoma.
Identification and validation of a lactate metabolism-related six-gene prognostic signature in intrahepatic cholangiocarcinoma.
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我们的研究揭示了 LDHA 在 iCCA 中的生物学作用,并开发了一个可靠的 iCCA 乳酸代谢相关预后模型,为临床 iCCA 提供了有前景的治疗靶点。
肝内胆管癌(iCCA)是一种高度恶性和致命的肝脏肿瘤,全球发病率不断上升。乳酸代谢最近被报道为肿瘤进展和肿瘤微环境中免疫调节的关键因素。然而,乳酸代谢在iCCA中的生物学功能仍鲜有明确,这阻碍了预后工具和治疗干预措施的发展。
采用单因素Cox回归分析和Boruta算法识别关键乳酸代谢相关基因(LMRGs),并基于LMRG评分构建预后特征。在高、低LMRG评分组中评估基因组变异和免疫细胞浸润。最后,通过体外和体内实验验证关键LMRGs的生物学功能。
高LMRG评分组患者相比低LMRG评分组患者预后较差,且TP53和KRAS突变频率高。此外,高LMRG评分组中NK细胞的浸润和功能受损,这与两个独立的单细胞RNA测序数据集及组织微阵列免疫组化结果一致。实验数据显示,乳酸脱氢酶A(LDHA)敲低抑制了iCCA细胞系的增殖和迁移,以及免疫健全小鼠的肿瘤生长。
Intrahepatic cholangiocarcinoma (iCCA) is a highly malignant and fatal liver tumor with increasing incidence worldwide. Lactate metabolism has been recently reported as a crucial contributor to tumor progression and immune regulation in the tumor microenvironment. However, it remains poorly identified about the biological functions of lactate metabolism in iCCA, which hinders the development of prognostic tools and therapeutic interventions.
The univariate Cox regression analysis and Boruta algorithm were utilized to identify key lactate metabolism-related genes (LMRGs), and a prognostic signature was constructed based on LMRG scores. Genomic variations and immune cell infiltration were evaluated in the high and low LMRG score groups. Finally, the biological functions of key LMRGs were verified with in vitro and in vivo experiments.
Patients in the high LMRG score group exhibit a poor prognosis compared to those in the low LMRG score group, with a high frequency of TP53 and KRAS mutations. Moreover, the infiltration and function of NK cells were compromised in the high LMRG score group, consistent with the results from two independent single-cell RNA sequencing datasets and immunohistochemistry of tissue microarrays. Experimental data revealed that lactate dehydrogenase A (LDHA) knockdown inhibited proliferation and migration in iCCA cell lines and tumor growth in immunocompetent mice.
Our study revealed the biological roles of LDHA in iCCA and developed a reliable lactate metabolism-related prognostic signature for iCCA, offering promising therapeutic targets for iCCA in the clinic.
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