CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Emerging potential of immunopeptidomics by mass spectrometry in cancer immunotherapy.
Emerging potential of immunopeptidomics by mass spectrometry in cancer immunotherapy.
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随着分析技术的显著进步,癌症免疫治疗领域的研究,如过继性 T 细胞治疗、癌症疫苗和免疫检查点阻断(ICB),目前正获得巨大的发展势头。由于癌症免疫治疗的疗效仅在少数患者中得到认可,因此更有效的肿瘤特异性抗原(TSA,也称为新抗原)和治疗反应的预测标志物备受关注。在癌症免疫中,由人类白细胞抗原(HLA)I 类分子呈递的免疫肽作为免疫原性的起始介质发挥作用。跨学科多组学方法的最新进展迅速启发了我们对癌症“暗物质”身份及相关免疫肽的认识。在这一领域,质谱(MS)是一个可行的选择,因为它可以筛选天然加工并实际呈递的 TSA 候选物,从而掌握免疫肽组的全貌。在过去几年中,多组学方法扩大了搜索空间,质谱仪的灵敏度得到提高,深度/机器学习支持的肽搜索算法将免疫肽组学提升到了新的水平。在这篇综述中,在介绍免疫肽组学关键技术进展的同时,将从癌症免疫治疗的角度回顾免疫肽组学的潜力和进一步方向。
With significant advances in analytical technologies, research in the field of cancer immunotherapy, such as adoptive T cell therapy, cancer vaccine, and immune checkpoint blockade (ICB), is currently gaining tremendous momentum. Since the efficacy of cancer immunotherapy is recognized only by a minority of patients, more potent tumor-specific antigens (TSAs, also known as neoantigens) and predictive markers for treatment response are of great interest. In cancer immunity, immunopeptides, presented by human leukocyte antigen (HLA) class I, play a role as initiating mediators of immunogenicity. The latest advancement in the interdisciplinary multiomics approach has rapidly enlightened us about the identity of the "dark matter" of cancer and the associated immunopeptides.
In this field, mass spectrometry (MS) is a viable option to select because of the naturally processed and actually presented TSA candidates in order to grasp the whole picture of the immunopeptidome. In the past few years the search space has been enlarged by the multiomics approach, the sensitivity of mass spectrometers has been improved, and deep/machine-learning-supported peptide search algorithms have taken immunopeptidomics to the next level.
In this review, along with the introduction of key technical advancements in immunopeptidomics, the potential and further directions of immunopeptidomics will be reviewed from the perspective of cancer immunotherapy.
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