RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Development of a Combined Oxidative Stress and Endoplasmic Reticulum Stress-Related Prognostic Signature for Hepatocellular Carcinoma.
Development of a Combined Oxidative Stress and Endoplasmic Reticulum Stress-Related Prognostic Signature for Hepatocellular Carcinoma.
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OESGs 特征在预测 HCC 患者的生存和治疗反应方面表现出色。
氧化应激与内质网应激是细胞应激过程的重要组成部分,在肿瘤的发生和进展中起着关键作用。
首先,通过免疫组织化学方法在68例人肝细胞癌(HCC)组织芯片样本中检测氧化应激与内质网应激之间的相关性。随后在HCC中筛选差异表达的氧化应激和内质网应激相关基因(OESGs)。接下来,在训练队列(来自The Cancer Genome Atlas的TCGA-LIHC)中,通过最小绝对收缩和选择算子Cox及逐步Cox回归分析,构建了HCC的OESGs预后特征,并在外部队列(来自Gene Expression Omnibus的GSE14520)中进行了验证。采用MCP counter评估免疫细胞浸润。使用C-index评估预后特征的预测能力。最后,基于Cox回归分析的结果,构建了预后列线图模型以预测HCC患者的生存概率。
我们在人类HCC样本中证明了氧化应激与内质网应激之间存在正相关。随后,我们确定了五个OESGs(IL18RAP、ECT2、PPARGC1A、STC2和NQO1)作为HCC的预后特征。相关风险评分与肿瘤分期、分级以及对经导管动脉化疗栓塞治疗的反应相关,且高风险评分组的T细胞、CD8+ T细胞、细胞毒性淋巴细胞和NK 细胞浸润较少。我们的OESGs预后特征的C-index优于先前发表的四个特征。此外,我们基于OESGs预后特征和临床参数为HCC患者开发了一个列线图,这是一种有效的定量分析工具,用于预测患者生存。
Oxidative stress and endoplasmic reticulum stress are important components of the cellular stress process, which plays a critical role in tumor initiation and progression.
First, the correlation between oxidative stress and endoplasmic reticulum stress was detected in 68 human hepatocellular carcinoma (HCC) tissue microarray samples by immunohistochemistry. Differentially expressed oxidative stress- and endoplasmic reticulum stressrelated genes (OESGs) then were screened in HCC. Next, an OESGs prognostic signature was constructed for HCC in the training cohort (TCGA-LIHC from The Cancer Genome Atlas), by least absolute shrinkage and selection operator Cox and stepwise Cox regression analyses, and was verified in the external cohort (GSE14520 from the Gene Expression Omnibus). The MCP counter was employed to evaluate immune cell infiltration. The C-index was used to evaluate the predictive power of prognostic signature. Finally, a prognostic nomogram model was constructed to predict the survival probability of patients with HCC based on the results of Cox regression analysis.
We demonstrated a positive correlation between oxidative stress and endoplasmic reticulum stress in human HCC samples. We then identified five OESGs as a prognostic signature consisting of IL18RAP, ECT2, PPARGC1A, STC2 , and NQO1 for HCC. Related risk scores correlated with tumor stage, grade, and response to transcatheter arterial chemoembolization therapy, and the higher risk score group had less T cells, CD8+ T cells, cytotoxic lymphocytes and natural killer cell infiltration. The C-index of our OESGs prognostic signature was superior to four previously published signatures. Furthermore, we developed a nomogram based on the OESGs prognostic signature and clinical parameters for patients with HCC that is an effective quantitative analysis tool to predict patient survival.
The OESGs signature showed excellent performance in predicting survival and therapeutic responses for patients with HCC.
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