RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Immune characteristics and genetic markers of esophageal cancer by single-cell analysis: implications for immunotherapy.
Immune characteristics and genetic markers of esophageal cancer by single-cell analysis: implications for immunotherapy.
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具有相同细胞表面标志物的细胞群表现出细胞间差异,这些差异对细胞功能产生相当大的影响。我们的研究将有助于理解 EC 患者的 TME 和细胞异质性,并为未来深入探索 EC 的发病机制和识别潜在治疗靶点提供宝贵的资源。
食管癌(EC)是全球最常见的癌症之一。相同分期EC患者的预后可能差异很大。单细胞分析技术的进步加深了对肿瘤异质性的理解。本文旨在应用单细胞分析探索EC肿瘤环境特征,并为个体化治疗提供依据。
从癌症基因组图谱(TCGA)基因组数据共享(GDC)应用程序编程接口(API)下载了EC样本单细胞测序结果的最新基因表达数据和临床随访信息。使用生物信息学分析方法对肿瘤微环境(TME)中的免疫浸润特征因子进行了差异基因功能分析,并寻找潜在的分子靶点。
我们在EC和癌旁样本中鉴定出特定的细胞亚群,包括面板细胞、自然杀伤(NK)细胞、耗竭性分化簇(CD)8+ T细胞、CD8+记忆T(Tcm)细胞和效应记忆T(Tem)细胞,其中癌样本中B细胞富集。在II期和III期肿瘤中检测到B细胞和单核细胞之间的差异,这可能与RNA转录和降解有关。CXCL8蛋白被鉴定为有效的潜在预后标志物。
Esophageal cancer (EC) is one of the most common cancers worldwide. The prognoses for patients with the same stage of EC can vary substantially. The progress of single-cell analysis technology has furthered the understanding of tumor heterogeneity. This paper aimed to apply single-cell analysis to explore the characteristics of the tumor environment of EC and provide a basis for personalized treatment.
The latest gene expression data and clinical follow-up information of single-cell sequencing results of EC samples were downloaded from The Cancer Genome Atlas (TCGA) Genomic Data Commons (GDC) Application Programming Interface (API). A differential gene function analysis of the immune infiltration signature agents in the tumor microenvironment (TME) was performed using bioinformatics analytical methods, and potential molecular targets were sought.
We identified specific cell subsets in the EC and paracancerous samples, including panel cells, natural killer (NK) cells, exhausted cluster of differentiation (CD)8 + T cells, CD8 + memory T (Tcm) cells, and effector memory T (Tem) cells, including B cell enrichment in the cancer samples. Differences were detected between B cells and monocytes in stage II and III tumors, which may be related to RNA transcription and degradation. The CXCL8 protein was identified as a valid potential prognostic marker.
Cell groups with homogenous cell surface markers exhibit intercellular variations that exert a considerable effect on cell function. Our study will contribute to the understanding of the TME and cellular heterogeneity in EC patients and serve as a valuable resource for in-depth exploration of the pathogenesis of EC and the identification of potential therapeutic targets in the future.
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