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ARHGEF6 在肺腺癌中的病理意义及潜在机制

英文原题:The pathological significance and potential mechanism of ARHGEF6 in lung adenocarcinoma.

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The pathological significance and potential mechanism of ARHGEF6 in lung adenocarcinoma.

PubMed 2023/04/10(内容时间) Comput Biol Med

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研究概要

ARHGEF6 在 LUAD 中发挥抑癌作用,可能作为新的预后标志物和潜在治疗靶点。调节肿瘤微环境和免疫、抑制癌细胞中 UGTs 和 ECM 成分的表达以及降低肿瘤干性可能是 ARHGEF6 在 LUAD 中发挥作用的部分机制。

研究思路结论见上方概要

新出现的证据表明ARHGEF6参与癌症,但其确切意义和潜在机制尚不清楚。本研究旨在阐明ARHGEF6在肺腺癌(LUAD)中的病理意义和潜在机制。

采用生物信息学和实验方法分析ARHGEF6在LUAD中的表达、临床意义、细胞功能及潜在机制。

ARHGEF6在LUAD肿瘤组织中表达下调,并与不良预后和肿瘤干性呈负相关,与Stromal评分、Immune评分和ESTIMATE评分呈正相关。ARHGEF6的表达水平还与药物敏感性、免疫细胞丰度、免疫检查点基因表达水平及免疫治疗反应相关。在LUAD组织中,肥大细胞、T细胞和NK细胞是ARHGEF6表达最高的前三种细胞。ARHGEF6过表达可降低LUAD细胞的增殖和迁移以及异种移植肿瘤的生长,而重新敲低ARHGEF6可逆转这些效应。RNA测序结果显示,ARHGEF6过表达引起LUAD细胞表达谱的显著变化,编码尿苷5'-二磷酸-葡萄糖醛酸转移酶(UGTs)和细胞外基质(ECM)成分的基因表达下调。

展开英文摘要原文

Emerging evidences suggest that ARHGEF6 is involved in cancers but the exact significance and underlying mechanism are unclear. This study aimed to elucidate the pathological significance and potential mechanism of ARHGEF6 in lung adenocarcinoma (LUAD).

Bioinformatics and experimental methods were used to analyze the expression, the clinical significance, the cellular function and potential mechanisms of ARHGEF6 in LUAD.

ARHGEF6 was downregulated in LUAD tumor tissues and correlated negatively with poor prognosis and tumor stemness, positively with the Stromal score, the Immune score and the ESTIMATE score. The expression level of ARHGEF6 was also associated with drug sensitivity, the abundance of immune cells, the expression levels of Immune checkpoint genes and immunotherapy response. Mast cells, T cells and NK cells were the first three cells with the highest expression of ARHGEF6 in LUAD tissues. Overexpression of ARHGEF6 reduced proliferation and migration of LUAD cells and the growth of xenografted tumors, which could be reversed by re-knockdown of ARHGEF6. Results of RNA sequencing revealed that ARHGEF6 overexpression induced significant changes in the expression profile of LUAD cells, and genes encoding uridine 5'-diphosphate-glucuronic acid transferases (UGTs) and extracellular matrix (ECM) components were downregulated.

ARHGEF6 functions as a tumor suppressor in LUAD and may serve as a new prognostic marker and potential therapeutic target. Regulating tumor microenvironment and immunity, inhibiting the expression of UGTs and ECM components in the cancer cells, and decreasing the stemness of the tumors may among the mechanisms underlying the function of ARHGEF6 in LUAD.

论文信息

作者
Zheng T、Zhou H、Zheng Z、Guo Y、Liu J、Zhang J、Li S
第一作者单位
Department of Thoracic and Cardiovascular Surgery, The First Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi, Zhuang Autonomous Region, 530021, PR China.China
通讯作者单位
Department of Thoracic and Cardiovascular Surgery, The First Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi, Zhuang Autonomous Region, 530021, PR China. Electronic address: shikangli@hotmail.com.China
文献类型
非美国政府资助研究
期刊
Computers in biology and medicine2023 May
原文标识
PubMed 37058762 · DOI 10.1016/j.compbiomed.2023.106894