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合成生物学、基因线路与机器学习:癌症治疗的新时代

英文原题:Synthetic biology, genetic circuits and machine learning: a new age of cancer therapy.

查看英文原题

Synthetic biology, genetic circuits and machine learning: a new age of cancer therapy.

PubMed 2023/04/01(内容时间) Mol Oncol Q2 · IF 4.5(JCR 2025)

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中文摘要

合成生物学使研究者能够重编程细胞天然反应以治疗疾病,CAR-T 癌症免疫疗法是其代表。继利用合成受体激活T细胞取得成功后,研究领域正探索诱导非经典信号通路和复杂合成基因回路,以增强工程化T细胞抗肿瘤表型。本文评述两项近期概念验证研究。第一项将来自不同免疫受体的非天然信号基序组合为CAR,驱动独特信号通路并增强T细胞杀瘤能力;机器学习辅助筛选,并能根据基序选择成功预测CAR-T 表型。第二项将合成锌指设计为可控转录调节因子,其活性取决于FDA批准小分子药物的有无。这些研究拓展了未来基因回路设计选择,显示单一细胞疗法可响应多种环境信号,包括靶细胞抗原、肿瘤微环境组成和小分子药物。

展开英文摘要原文

Synthetic biology has made it possible to rewire natural cellular responses to treat disease, notably demonstrated by chimeric antigen receptor (CAR) T cells as cancer immunotherapy. Building on the success of T-cell activation using synthetic receptors, the field is now investigating how induction of noncanonical signalling pathways and sophisticated synthetic gene circuitry can enhance the antitumour phenotype of engineered T cells.

This commentary explores two recently published studies that provide proof of concept for how new technologies achieve this. The first demonstrated that non-naturally occurring combinations of signalling motifs derived from various immune receptors and arranged as a CAR drove unique signal transduction pathways in T cells and improved their tumour killing ability.

Here, machine learning complemented the screening process and successfully predicted CAR T-cell phenotype dependent on signalling motif choice. The second explored how synthetic zinc fingers can be engineered into controllable transcriptional regulators, where their activity was dependent on the presence or absence of FDA-approved small-molecule drugs.

These studies are pivotal in expanding the design choices available for gene circuits of the future and highlight how a single cellular therapy could respond to multiple environmental cues including target cell antigen expression, the tumour microenvironment composition and small molecule drugs.

论文信息

作者
Prasad K、Cross RS、Jenkins MR
单位
Immunology Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic., Australia.Australia
文献类型
非美国政府资助研究
期刊
Molecular oncology2023 Jun
原文标识
PubMed 37002698 · DOI 10.1002/1878-0261.13420