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人 T 细胞的大规模并行敲入工程

英文原题:Massively parallel knock-in engineering of human T cells.

查看英文原题

Massively parallel knock-in engineering of human T cells.

PubMed 2023/01/26(内容时间) Nat Biotechnol Q1 · IF 44.5(JCR 2025)

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中文摘要

针对细胞治疗应用的定点敲入通常效率较低,规模也有限。本研究开发了CLASH系统,可实现高效、高通量的敲入工程改造。在CLASH中,Cas12a/Cpf1 mRNA与混合腺相关病毒共同介导同步基因编辑和精确转基因敲入,通过大规模并行同源定向修复,产生一组稳定整合的突变变体,每个变体均经过靶向基因编辑。研究者将这一技术应用于原代人T细胞,并在血液癌和实体瘤模型中,使用CD3、CD8和CD4 T细胞开展时间序列CLASH实验,从而以混合方式生成CAR-T 变体,并无偏筛选有利变体。CLASH实验发现,一种独特的CRISPR RNA(crRNA)可在CAR-T 细胞中产生PRDM1外显子3跳跃突变,使细胞增殖增强、呈现干细胞样特性、中央记忆表型和更长持久性;因此,细胞在包括实体瘤模型在内的多种癌症模型中体内疗效更高。CLASH用途广泛,可适用于多种细胞和治疗工程应用。

展开英文摘要原文

The efficiency of targeted knock-in for cell therapeutic applications is generally low, and the scale is limited. In this study, we developed CLASH, a system that enables high-efficiency, high-throughput knock-in engineering. In CLASH, Cas12a/Cpf1 mRNA combined with pooled adeno-associated viruses mediate simultaneous gene editing and precise transgene knock-in using massively parallel homology-directed repair, thereby producing a pool of stably integrated mutant variants each with targeted gene editing.

We applied this technology in primary human T cells and performed time-coursed CLASH experiments in blood cancer and solid tumor models using CD3, CD8 and CD4 T cells, enabling pooled generation and unbiased selection of favorable CAR-T variants.

Emerging from CLASH experiments, a unique CRISPR RNA (crRNA) generates an exon3 skip mutant of PRDM1 in CAR-Ts, which leads to increased proliferation, stem-like properties, central memory and longevity in these cells, resulting in higher efficacy in vivo across multiple cancer models, including a solid tumor model. The versatility of CLASH makes it broadly applicable to diverse cellular and therapeutic engineering applications.

论文信息

作者
Dai X、Park JJ、Du Y、Na Z、Lam SZ、Chow RD、Renauer PA、Gu J
第一作者单位
Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.United States
通讯作者单位
Department of Genetics, Yale University School of Medicine, New Haven, CT, USA. sidi.chen@yale.edu.United States
文献类型
美国政府(非公共卫生署)资助研究 · 美国 NIH 资助研究 · 非美国政府资助研究
期刊
Nature biotechnology2023 Sep
原文标识
PubMed 36702900 · DOI 10.1038/s41587-022-01639-x