RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Perturbations in common and distinct inflammatory pathways associated with morning and evening fatigue in outpatients receiving chemotherapy.
Perturbations in common and distinct inflammatory pathways associated with morning and evening fatigue in outpatients receiving chemotherapy.
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本研究描述了与晨间和/或晚间疲劳相关的常见及独特炎症通路的扰动。PI3K-Akt 被确定为瓶颈通路。该分析确定了针对这一常见且极具破坏性的临床问题进行治疗干预的潜在靶点。
高达94%的癌症患者会出现中度至重度疲劳。近期证据表明,晨间疲劳和夜间疲劳是身体疲劳的两个不同维度。本研究的目的在于评估接受化疗的患者中,报告低水平与高水平晨间癌症相关疲劳或低水平与高水平夜间癌症相关疲劳者转录组中常见及独特的炎症通路扰动。
患者在化疗治疗前一周完成了问卷调查。使用Lee疲劳量表评估晨间和晚间疲劳的严重程度。在两个独立样本中使用RNA测序(n = 357)和微阵列(n = 360)进行基因表达和通路影响分析(PIA)。使用知识网络(KN)评估这些扰动通路之间及内部的相互作用模式。
在PIA中,有九条扰动通路(FDR < 0.025)为晨间疲劳和晚间疲劳所共有,六条为晨间疲劳所特有,四条为晚间疲劳所特有。KN(19个节点,39条边)识别出磷脂酰肌醇3-激酶(PI3K)-Akt通路节点(在晚间疲劳中发生扰动),其具有最高的中介中心性(0.255)和接近中心性(0.255)指数。次高的中介中心性指数见于在晚间疲劳中发生扰动的通路(即核因子kappa B:0.200,NK 细胞介导的细胞毒性:0.178,丝裂原活化蛋白激酶:0.175)。
Moderate to severe fatigue occurs in up to 94% of patients with cancer. Recent evidence suggests that morning and evening fatigue are distinct dimensions of physical fatigue. The purposes of this study were to evaluate the transcriptome for common and distinct perturbed inflammatory pathways in patients receiving chemotherapy who reported low versus high levels of morning or low versus high levels of evening cancer-related fatigue.
Patients completed questionnaires during the week prior to their chemotherapy treatment. Severity of morning and evening fatigue was evaluated using the Lee Fatigue Scale. Gene expression and pathway impact analyses (PIA) were performed in two independent samples using RNA-sequencing (n = 357) and microarray (n = 360). Patterns of interactions between and among these perturbed pathways were evaluated using a knowledge network (KN).
Across the PIA, nine perturbed pathways (FDR < 0.025) were common to both morning and evening fatigue, six were distinct for morning fatigue, and four were distinct for evening fatigue. KN (19 nodes, 39 edges) identified the phosphatidylinositol 3-kinase (PI3K)-Akt pathway node (perturbed in evening fatigue) with the highest betweenness (0.255) and closeness (0.255) centrality indices. The next highest betweenness centrality indices were seen in pathways perturbed in evening fatigue (i.e., nuclear factor kappa B: 0.200, natural killer cell-mediated cytotoxicity: 0.178, mitogen-activated protein kinase: 0.175).
This study describes perturbations in common and distinct inflammatory pathways associated with morning and/or evening fatigue. PI3K-Akt was identified as a bottleneck pathway. The analysis identified potential targets for therapeutic interventions for this common and devastating clinical problem.
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