RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Robust pyroptosis risk score guides the treatment options and predicts the prognosis of bladder carcinoma.
Robust pyroptosis risk score guides the treatment options and predicts the prognosis of bladder carcinoma.
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本研究开发并验证了一个稳健的细胞焦亡风险评分,该评分可预测 BLCA 的临床结局和肿瘤微环境免疫表型。
膀胱癌(BLCA)具有异质性,难以制定恰当的个体化治疗方案并准确预测预后。本研究从细胞焦亡这一新视角开发风险评分,以指导BLCA精准治疗和预后评估。
从癌症基因组图谱(TCGA)数据库下载TCGA-BLCA队列数据,从基因表达综合数据库(GEO)获取两个外部验证队列,并从本院招募另一独立验证队列(湘雅队列)。研究采用最小绝对收缩与选择算子(LASSO)算法和Cox回归模型建立细胞焦亡风险评分,随后分析该评分与预后、肿瘤微环境(TME)免疫特征以及多种疗法(包括抗癌免疫治疗、化疗、放疗和靶向治疗)的关联。
细胞焦亡风险评分是BLCA的独立预后预测因子。抗癌免疫应答循环的多个步骤,包括癌细胞抗原释放、CD8 T细胞募集和NK细胞募集,在高风险组中的活性显著高于低风险组。相应肿瘤浸润免疫细胞(TIIC),如CD8 T细胞和NK细胞的浸润水平,也与该风险评分呈正相关。因此,高风险BLCA可能具有炎症型表型。同时,多种免疫检查点(如PD-L1、CTLA-4和PD-1)的表达,以及与免疫治疗应答正相关基因特征的富集评分,也与风险评分正相关。因此,高细胞焦亡风险患者可能对免疫治疗更敏感。此外,高风险患者可能对顺铂、多西他赛和紫杉醇等化疗药物更敏感。该风险评分还能准确预测BLCA分子亚型,并在多个独立系统中得到交叉验证。
本研究建立并验证了一种稳健的细胞焦亡风险评分,可预测BLCA临床结局和TME免疫表型。总体而言,该评分有助于推动BLCA患者的精准治疗。
Bladder carcinoma (BLCA) is a heterogeneous disease that makes it difficult to achieve proper individual treatment and predict prognosis. This study aimed to develop a risk score from a new perspective of pyroptosis and guide accurate treatment and prognosis prediction for BLCA.
The TCGA-BLCA cohort data were downloaded from The Cancer Genome Atlas database. Two external validation cohorts were collected from the Gene Expression Omnibus. Another independent validation cohort (the Xiangya cohort) was recruited from our hospital. The least absolute shrinkage and selector operation (LASSO) algorithm and Cox regression models were used to establish the pyroptosis risk score. Thereafter, we correlated the pyroptosis risk score with prognosis, tumor microenvironment (TME) immune hallmarks, and multiple treatments, including anticancer immunotherapy, chemotherapy, radiotherapy, and targeted therapy.
The pyroptosis risk score was an independent prognostic predictor of BLCA. We found that the activities of multiple steps of the anticancer immune response cycle, such as the release of cancer cell antigens, CD8 T cell recruitment, and NK cell recruitment, were significantly higher in the high-risk score group than in the low-risk score group. In addition, the infiltration levels of the corresponding tumor-infiltrating immune cells (TIICs), such as CD8 T cells and NK cells, were positively correlated with the pyroptosis risk score. Thus, BLCA with a high-risk score may be associated with inflamed phenotypes. Simultaneously, the expression of multiple immune checkpoints (such as PD-L1, CTLA-4, and PD-1) and enrichment scores of gene signatures positively correlated with immunotherapy response were positively correlated with the pyroptosis risk score. Therefore, patients with a high pyroptosis risk score may be more sensitive to immunotherapy. In addition, patients with high pyroptosis risk scores may be more sensitive to chemotherapeutic drugs, such as cisplatin, docetaxel, and paclitaxel. In addition, the pyroptosis risk score accurately predicted the molecular subtypes of BLCA, which were cross-validated in several independent systems.
This study developed and validated a robust pyroptosis risk score that can predict the clinical outcomes and TME immune phenotypes of BLCA. In summary, the pyroptosis risk score helps drive precision therapy in patients with BLCA.
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