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丝氨酸蛋白酶抑制剂 Kazal 1 型,一种用于肝细胞癌早期检测、靶向及免疫检查点阻断治疗反应预测的潜在生物标志物

英文原题:Serine Protease Inhibitor Kazal Type 1, A Potential Biomarker for the Early Detection, Targeting, and Prediction of Response to Immune Checkpoint Blockade Therapies in Hepatocellular Carcinoma.

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Serine Protease Inhibitor Kazal Type 1, A Potential Biomarker for the Early Detection, Targeting, and Prediction of Response to Immune Checkpoint Blockade Therapies in Hepatocellular Carcinoma.

PubMed 2022/07/18(内容时间) Front Immunol Q1 · IF 7(JCR 2025)

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研究概要

SPINK1 可能成为 HCC 管理中早期检测、靶向治疗和预测 ICB 治疗反应的潜在生物标志物。

研究思路结论见上方概要

我们旨在将丝氨酸蛋白酶抑制剂 Kazal 1型(SPINK1)描述为肝细胞癌(HCC)早期诊断、分子靶向及免疫检查点阻断(ICB)治疗反应预测的基因标志物。

转录组学、蛋白质组学和表型分析分别或联合进行。

我们在SPINK1上获得了以下发现。首先,在转录组训练数据集中,该数据集包括279例I期和II期肿瘤样本(来自1,884例I-IV期HCC标本)和259例正常样本,与alpha-fetoprotein(AFP)相比,SPINK1相关模型在HCC判别中显示出显著更高的area under curve(AUC)值以及增加的integrated discrimination improvement(IDI)和net reclassification improvement(NRI)。两个SPINK1相关曲线的校准均显著优于AFP。在两个独立的转录组验证数据集中,分别包括201例、103例I-II期肿瘤样本和192例、169例配对非肿瘤标本,所获得的结果与上述发现一致。在蛋白质组训练数据集中,该数据集包括98例I期和II期肿瘤样本和165例正常组织样本,分析还显示在上述SPINK1相关设置中具有更好的AUC以及增加的IDI和NRI。相对于AFP的较差结果,两个SPINK1相关模型均显示出中等校准。其次,在体外和/或体内小鼠模型中,湿实验证明SPINK1促进HCC细胞的增殖、克隆形成、迁移、化疗耐药、抗凋亡、肿瘤发生和转移,而抗SPINK1抗体抑制细胞生长,表明SPINK1在HCC管理中具有“肿瘤标志物”和“可靶向”特征。基因本体(GO)和京都基因与基因组百科全书(KEGG)分析显示,SPINK1参与免疫相关通路,包括T-cell activation。第三,在对来自癌症基因组图谱(TCGA)队列的368例HCC标本进行的转录组学分析中,SPINK1的高丰度与活化的肿瘤浸润性CD4+和CD8+T淋巴细胞以及树突状细胞和NK 细胞的高水平呈正相关,同时SPINK1与免疫检查点之间也存在正相关,包括PD-1、LAG-3、TIM-3、TIGIT、HAVCR2和CTLA-4。ESTIMATE算法计算出SPINK1与免疫评分和ESTIMATE评分之间呈正相关,提示SPINK1与HCC组织内的免疫原性微环境密切相关,这可能有助于预测患者对ICB治疗的反应。

展开英文摘要原文

We aimed to characterize serine protease inhibitor Kazal type 1 ( SPINK1 ) as a gene signature for the early diagnosis, molecular targeting, and prediction of immune checkpoint blockade (ICB) treatment response of hepatocellular carcinoma (HCC).

The transcriptomics, proteomics, and phenotypic analyses were performed separately or in combination.

We obtained the following findings on SPINK1 . Firstly, in the transcriptomic training dataset, which included 279 stage I and II tumor samples (out of 1,884 stage I-IV HCC specimens) and 259 normal samples, significantly higher area under curve (AUC) values and increased integrated discrimination improvement (IDI) and net reclassification improvement (NRI) were demonstrated for HCC discrimination in SPINK1 -associated models compared with those of alpha-fetoprotein (AFP). The calibration of both SPINK1 -related curves fitted significantly better than that of AFP. In the two independent transcriptomic validation datasets, which included 201, 103 stage I-II tumor and 192, 169 paired non-tumor specimens, respectively, the obtained results were consistent with the above-described findings. In the proteomic training dataset, which included 98 stage I and II tumor and 165 normal tissue samples, the analyses also revealed better AUCs and increased IDI and NRI in the aforementioned SPINK1 -associated settings. A moderate calibration was shown for both SPINK1 -associated models relative to the poor results of AFP. Secondly, in the in vitro and/or in vivo murine models, the wet-lab experiments demonstrated that SPINK1 promoted the proliferation, clonal formation, migration, chemoresistance, anti-apoptosis, tumorigenesis, and metastasis of HCC cells, while the anti- SPINK1 antibody inhibited the growth of the cells, suggesting that SPINK1 has "tumor marker" and "targetable" characteristics in the management of HCC. The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses revealed that SPINK1 was engaged in immunity-related pathways, including T-cell activation. Thirdly, in the transcriptomic analyses of the 368 HCC specimens from The Cancer Genome Atlas (TCGA) cohort, the high abundance of SPINK1 was positively correlated with the high levels of activated tumor-infiltrating CD4 + and CD8 + T lymphocytes and dendritic and natural killer cells, while there were also positive correlations between SPINK1 and immune checkpoints, including PD-1, LAG-3, TIM-3, TIGIT, HAVCR2, and CTLA-4. The ESTIMATE algorithm calculated positive correlations between SPINK1 and the immune and ESTIMATE scores, suggesting a close correlation between SPINK1 and the immunogenic microenvironment within HCC tissues, which may possibly help in predicting the response of patients to ICB therapy.

SPINK1 could be a potential biomarker for the early detection, targeted therapy, and prediction of ICB treatment response in the management of HCC.

论文信息

作者
Jia J、Ga L、Liu Y、Yang Z、Wang Y、Guo X、Ma R、Liu R
单位
Department of Pathophysiology, College of Basic Medical Sciences, Dalian Medical University, Dalian, China.China
文献类型
非美国政府资助研究
期刊
Frontiers in immunology2022
原文标识
PubMed 35924241 · DOI 10.3389/fimmu.2022.923031