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一种潜在的诊断和预后生物标志物 TMEM176B 及其与皮肤黑色素瘤免疫浸润的关系

英文原题:A Potential Diagnostic and Prognostic Biomarker TMEM176B and Its Relationship With Immune Infiltration in Skin Cutaneous Melanoma.

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A Potential Diagnostic and Prognostic Biomarker TMEM176B and Its Relationship With Immune Infiltration in Skin Cutaneous Melanoma.

PubMed 2022/03/23(内容时间) Front Cell Dev Biol Q1 · IF 5.3(JCR 2025)

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中文摘要

黑色素瘤是一种高度恶性且侵袭性强的肿瘤。寻找新的有效生物标志物有助于早期诊断和治疗,最终改善黑色素瘤患者的预后。尽管跨膜蛋白 TMEM176B 已与多种癌症相关联,但其在癌症免疫中的作用仍不清楚。

从 TCGA 和 GTEx 收集了 TMEM176B 在正常组织和包括皮肤 cutaneous 黑色素瘤(SKCM)在内的几种癌症中的表达水平。我们使用受试者工作特征曲线和 Kaplan-Meier 生存曲线,并进行回归分析,以阐明 TMEM176B 与 SKCM 临床病理特征之间的联系,从而确定 TMEM176B 在 SKCM 中的预后意义。然后,我们使用 GEPIA 和 STRING 网站搜索可能与 TMEM176B 相互作用的蛋白质和相关顶级基因,并对其进行富集分析。随后,使用 TIMER、CIBERSORT 算法和 R(v3.6.3)的 GSVA 包研究了 TMEM176B 与免疫细胞浸润之间的联系。最后,进行动物实验以确认 Tmem176b 的表达及其对 T 细胞免疫浸润的影响。

与正常组织相比,SKCM 中 TMEM176B 表达显著升高。特别是,TMEM176B 表达还与病理分期、肿瘤溃疡和放射治疗相关。根据生存分析,TMEM176B 表达升高的患者预后更好。SKCM 中大多数TIL(肿瘤浸润淋巴细胞)(TILs),尤其是 T 细胞,与 TMEM176B 表达呈正相关。我们的动物实验也证实,在 Tmem176b 敲除小鼠的局部黑色素瘤组织中,T 细胞浸润显著受到抑制。同时敲除Tmem176b加速了肿瘤进展并损害了T细胞效应功能。

TMEM176B在SKCM中的表达上调与更好的预后相关,有潜力作为该疾病的诊断和预后标志物。它可能通过调节CD8+ T细胞成为SKCM免疫治疗的靶点,尽管尚需更多证据。

展开英文摘要原文

Background: Melanoma is a highly malignant and aggressive tumor. The search for new and effective biomarkers facilitates early diagnosis and treatment, ultimately improving the prognosis of melanoma patients. Although the transmembrane protein TMEM176B has been linked to a number of cancers, its role in cancer immunity remains unknown. Methods: Expression levels of TMEM176B in normal tissues and several cancers, including Skin Cutaneous Melanoma (SKCM), were collected from TCGA and GTEx.

We used Receiver operating characteristic and Kaplan-Meier survival curves and performed regression analysis to elucidate the link between TMEM176B and clinicopathological features of SKCM in order to determine the prognostic significance of TMEM176B in SKCM.

We then used the GEPIA and STRING websites to search for proteins and associated top genes that may interact with TMEM176B and enriched them for analysis. The link between TMEM176B and immune cells infiltration was then investigated using TIMER, CIBERSORT algorithm and GSVA package of R (v3. 6. 3).

Finally, animal tests were conducted to confirm the expression of Tmem176b and its influence on T-cell immune infiltration. Results: TMEM176B expression was considerably elevated in SKCM compared to normal tissues. Particularly, TMEM176B expression was also linked to pathological stage, tumor ulceration and radiation therapy. Patients with elevated TMEM176B expression had a better prognosis, according to the survival analysis. The majority of tumor infiltrating lymphocytes (TILs) especially T cells in SKCM was positively linked with TMEM176B expression.

Our animal experiments also verified that the T-cell infiltration was significantly inhibited in local melanoma tissue of Tmem176b knockout mice. At the same time deleting Tmem176b accelerated tumor progress and impaired T cells effector function. Conclusion: Upregulated expression of TMEM176B in SKCM is associated with a better prognosis and it has the potential to serve as a diagnostic and prognostic marker for the disease. It may serve as a target for SKCM immunotherapy by regulating CD8 + T cells although it requires more evidence.

论文信息

作者
Jiang L、Yang Y、Liu F、Ma M、Gao J、Sun L、Chen Y、Shen Z
第一作者单位
Department of Oncology, Affiliated Sixth People's Hospital, Shanghai Jiaotong University, Shanghai, China.China
通讯作者单位
Jinshan Hospital Center for Tumor Diagnosis and Therapy, Jinshan Hospital, Fudan University, Shanghai, China.China
期刊
Frontiers in cell and developmental biology2022
原文标识
PubMed 35399535 · DOI 10.3389/fcell.2022.859958