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NK 细胞相关基因特征可预测胶质瘤的恶性程度及患者生存

英文原题:Natural killer cell-related gene signature predicts malignancy of glioma and the survival of patients.

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Natural killer cell-related gene signature predicts malignancy of glioma and the survival of patients.

PubMed 2022/03/02(内容时间) BMC Cancer Q2 · IF 4.1(JCR 2025)

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研究概要

NK 细胞相关基因特征可预测胶质瘤的恶性程度及患者生存,这些结果可能为胶质瘤恶性程度和个体化免疫治疗的研究提供新视角。

研究思路结论见上方概要

基于自然杀伤(NK)细胞的疗法是抗癌最有前景的策略之一。本研究旨在探讨脑胶质瘤中NK 细胞相关基因及其预后价值。

中国胶质瘤基因组图谱(CGGA)用于构建NK 细胞相关特征。通过多因素Cox比例风险模型建立风险评分。纳入CGGA数据库中326例具有全转录组表达数据的胶质瘤样本用于发现。癌症基因组图谱(TCGA)数据集用于验证。GO和KEGG用于揭示与NK 细胞相关特征相关的生物学过程和功能。我们还收集了胶质瘤患者的临床病理特征,以分析与肿瘤恶性程度和患者生存的关联。

我们筛选了NK相关基因以构建预后特征,并基于该特征确定了风险评分。我们发现NK相关风险评分独立于多种临床因素。NK 细胞基因表达与胶质瘤的临床病理特征相关。创新性地,我们证明了风险评分与免疫检查点之间的密切关系,并发现NK相关风险评分联合PD1/PDL1患者可以预测患者结局。

展开英文摘要原文

Natural killer (NK) cells-based therapies are one of the most promising strategies against cancer. The aim of this study is to investigate the natural killer cell related genes and its prognostic value in glioma.

The Chinese Glioma Genome Atlas (CGGA) was used to develop the natural killer cell-related signature. Risk score was built by multivariate Cox proportional hazards model. A cohort of 326 glioma samples with whole transcriptome expression data from the CGGA database was included for discovery. The Cancer Genome Atlas (TCGA) datasets was used for validation. GO and KEGG were used to reveal the biological process and function associated with the natural killer cell-related signature. We also collected the clinical pathological features of patients with gliomas to analyze the association with tumor malignancy and patients' survival.

We screened for NK-related genes to build a prognostic signature, and identified the risk score based on the signature. We found that NK-related risk score was independent of various clinical factors. Nature-killer cell gene expression is correlated with clinicopathological features of gliomas. Innovatively, we demonstrated the tight relation between the risk score and immune checkpoints, and found NK-related risk score combined with PD1/PDL1 patients could predict the patient outcome.

Natural killer cell-related gene signature can predict malignancy of glioma and the survival of patients, these results might provide new view for the research of glioma malignancy and individual immunotherapy.

论文信息

作者
Li C、Liu F、Sun L、Liu Z、Zeng Y
第一作者单位
Department of Neurosurgery, Xiangya Hospital, Central South University, 87 Xiangya Road, Changsha, 410008, Hunan, China.China
通讯作者单位
Department of Neurosurgery, Xiangya Hospital, Central South University, 87 Xiangya Road, Changsha, 410008, Hunan, China. zengyu@csu.edu.cn.China
期刊
BMC cancer2022 Mar 2
原文标识
PubMed 35236310 · DOI 10.1186/s12885-022-09230-y