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构建并验证宫颈癌代谢基因相关预后模型及其在肿瘤微环境和免疫中的作用

英文原题:Construction and validation of a metabolic gene-associated prognostic model for cervical carcinoma and the role on tumor microenvironment and immunity.

查看英文原题

Construction and validation of a metabolic gene-associated prognostic model for cervical carcinoma and the role on tumor microenvironment and immunity.

PubMed 2021/12/01(内容时间) Aging (Albany NY)

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中文摘要

代谢重编程是肿瘤细胞的常见特征,与肿瘤发生和进展相关。本研究利用癌症基因组图谱(TCGA)数据库中宫颈癌(CC)组织的多种生物信息学分析方法,构建了一个代谢基因相关预后模型(MGPM),该模型包含十五个差异表达代谢基因(DEMGs)。患者被分为总生存期(OS)较短的高风险组和生存期较好的低风险组。受试者工作特征(ROC)曲线分析显示,MGPM能精确预测CC患者的1年、3年和5年生存率。如预期所示,MGPM在TCGA的训练和测试数据集中表现出良好的预后意义。

此外,包括分期、肿瘤(T)和转移(M)分类在内的临床病理参数在低风险和高风险组间存在显著差异,进一步证明了MGPM具有优越的预后预测能力。

另外,低ESTMATEScore患者的总生存期较短,当这些患者与高风险评分结合时,预后更差。通过“CIBERSORT”包和Wilcoxon秩和检验,预后不良的高风险组患者显示出较低水平的CD8 T细胞浸润(P < 0.001)、记忆激活T细胞(P = 0.010)和静息肥大细胞(P < 0.001),以及较高水平的活化肥大细胞(P < 0.001),我们还发现这些患者对免疫抑制治疗的反应较差。这些发现表明,MGPM能准确预测CC患者的生存结果,这将有助于通过重编程癌细胞代谢进一步优化癌症免疫治疗。

展开英文摘要原文

Metabolic reprogramming is a common feature of tumor cells and is associated with tumorigenesis and progression. In this study, a metabolic gene-associated prognostic model (MGPM) was constructed using multiple bioinformatics analysis methods in cervical carcinoma (CC) tissues from The Cancer Genome Atlas (TCGA) database, which comprised fifteen differentially expressed metabolic genes (DEMGs). Patients were divided into a high-risk group with shorter overall survival (OS) and a low-risk group with better survival.

Receiver operating characteristic (ROC) curve analysis showed that the MGPM precisely predicted the 1-, 3- and 5-year survival of CC patients. As expected, MGPM exhibited a favorable prognostic significance in the training and testing datasets of TCGA. And the clinicopathological parameters including stage, tumor (T) and metastasis (M) classifications had significant differences in low- and high-risk groups, which further demonstrated the MGPM had a favorite prognostic prediction ability.

Additionally, patients with low-ESTMATEScore had a shorter OS and when those combined with high-risk scores presented a worse prognosis. Through "CIBERSORT" package and Wilcoxon rank-sum test, patients in the high-risk group with a poor prognosis showed lower levels of infiltration of T cell CD8 ( P < 0. 001), T cells memory activated ( P = 0. 010) and mast cells resting ( P < 0. 001), and higher levels of mast cells activated ( P < 0. 001), and we also found these patients had a worse response for immunosuppressive therapy.

These findings demonstrate that MGPM accurately predicts survival outcomes in CC patients, which will be helpful for further optimizing immunotherapies for cancer by reprogramming its cell metabolism.

论文信息

作者
Huang J、Luo F、Shi M、Luo J、Ma C、Li S、Wei Y、Guo R
第一作者单位
Department of Obstetrics and Gynecology, Affiliated Hospital of Guangdong Medical University, Zhanjiang 524001, Guangdong, PR China.China
通讯作者单位
Department of Pharmacy, Affiliated Hospital of Guangdong Medical University, Zhanjiang 524001, Guangdong, PR China.China
文献类型
非美国政府资助研究
期刊
Aging2021 Dec 1
原文标识
PubMed 34852326 · DOI 10.18632/aging.203723