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SCAMP4 是一种新的预后标志物,与胶质瘤的肿瘤进展和免疫浸润相关

英文原题:SCAMP4 is a novel prognostic marker and correlated with the tumor progression and immune infiltration in glioma.

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SCAMP4 is a novel prognostic marker and correlated with the tumor progression and immune infiltration in glioma.

PubMed 2021/08/12(内容时间) Int J Biochem Cell Biol Q2 · IF 3.5(JCR 2025)

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研究概要

结合所有这些发现,将 SCAMP4 鉴定为一种新的生物标志物,可能有助于阐明免疫微环境如何影响胶质瘤的发展。通过进一步分析,SCAMP4 可能成为胶质瘤预后的预测因子。

研究思路结论见上方概要

胶质瘤是最常见的脑肿瘤,具有高死亡率和发病率,患者预后仍然很差。胶质瘤治疗在很大程度上受到胶质瘤极强的侵袭能力以及LGG和GBM缺乏有价值生物标志物的限制。因此,识别有价值的生物标志物以治疗胶质瘤患者对我们来说既紧迫又重要。SCAMP4(分泌载体相关膜蛋白4)尚未有报道与癌症预后或任何治疗相关。

我们通过公开可用的CGGA(中国胶质瘤图谱)和TCGA(癌症基因组图谱)数据库分析了SCAMP4在LGG和GBM中的作用。应用CIBERSORT和TIMER分析SCAMP4与免疫细胞之间的相关性,同时利用R进行统计数据分析和。

我们的结果表明,SCAMP4与年龄、分期、分级和肿瘤状态相关,可能是LGG和GBM中有前景的独立预后因素。同时,SCAMP4的表达与一些肿瘤浸润免疫细胞如单核细胞、活化的NK细胞、巨噬细胞、静息肥大细胞等密切相关。此外,在对综合相关性的深入分析中,我们还发现异柠檬酸脱氢酶1(IDH1)与SCAMP4具有相似的预后价值。

展开英文摘要原文

Glioma is the most prevalent brain tumor with high mortality and morbidity and the prognosis of patients remains very poor. Glioma therapy is largely limited by the extraordinary invasive capability in glioma and the lack of valuable biomarkers of LGG and GBM. So it is urgent and important for us to identify valuable biomarkers to treat glioma patients. SCAMP4 (Secretory Carrier-Associated Membrane Protein 4) has not been reported to be linked to cancer prognostic or any treatments.

We analyzed the role of SCAMP4 in LGG and GBM via the publicly available CGGA (The Chinese Glioma Atlas) and TCGA (The Cancer Genome Atlas) databases. The correlations between SCAMP4 and the immune cells were analyzed by applying CIBERSORT and TIMER, while R was utilized in the analysis of the statistical data.

Our results indicated that SCAMP4 which is correlated to age, stage, grade and tumor status and may be a promising independent prognostic factor in LGG and GBM. Meanwhile, the expression of SCAMP4 is closely associated with some tumor-infiltrating immune cells such as Monocytes, NK cells activated, Macrophages, Mast cells resting and so on. Furthermore, during the in-depth analysis of the integrated correlations, we also find that isocitrate dehydrogenase 1 (IDH1) and SCAMP4 shared similar prognostic values.

Together with all these findings, the identification of SCAMP4 as a new biomarker could elucidate how the immune microenvironment influence the glioma development. With further analysis, SCAMP4 may be a predictor for glioma prognosis.

论文信息

作者
Ge X、Wang Z、Jiang R、Ren S、Wang W、Wu B、Zhang Y、Liu Q
第一作者单位
Medical School of Nantong University, Nantong, China; Department of Clinical Biobank, Nantong University Affiliated Hospital, Nantong, China.China
通讯作者单位
Department of Neurosurgery, Nantong University Affiliated Hospital, Nantong, China. Electronic address: ntfyliuqianqian@163.com.China
期刊
The international journal of biochemistry & cell biology2021 Oct
原文标识
PubMed 34390854 · DOI 10.1016/j.biocel.2021.106054