CAR-T(CAR-T)细胞疗法在非肿瘤性疾病中的应用
Chimeric antigen receptor T (CAR-T) cell therapy in non-oncological diseases.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:An immune exhaustion signature predicts prognosis and identifies patients with diffuse large B-cell lymphoma (DLBCL) who derive preferential benefit from chimeric antigen receptor (CAR)-T cell therapy.
An immune exhaustion signature predicts prognosis and identifies patients with diffuse large B-cell lymphoma (DLBCL) who derive preferential benefit from chimeric antigen receptor (CAR)-T cell therapy.
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DLBCL 中活跃的 T 细胞耗竭状态和抑制性 TME 驱动了不良的免疫表型。我们的 IERPS 模型捕捉到了这种功能障碍状态,它既是一个强大的预后工具,更重要的是,也是一个潜在的预测性生物标志物,用于识别那些看似通过 CAR-T 细胞治疗克服其固有不良预后的高风险患者。
肿瘤微环境(TME)是弥漫大B细胞淋巴瘤(DLBCL)预后的关键决定因素。尽管T细胞耗竭与治疗失败有关,但其精确的分子标志及其用于预测对现代免疫疗法(如嵌合抗原受体(CAR)-T细胞疗法)应答的效用仍不清楚。
我们对来自多个 DLBCL 队列(The Cancer Genome Atlas [TCGA]、GSE181063、GSE10846、GSE248835、GSE182434)的转录组学与临床数据进行了整合分析。我们采用无监督聚类、单细胞 RNA 测序数据的探索性分析,以及用于变量选择的最小绝对收缩和选择算子(LASSO-Cox)回归,以刻画耗竭型 TME、构建预后模型,并评估其对 CAR-T 细胞治疗的预测价值。该模型的动态变化在一项概念验证性纵向队列中进行了评估,该队列由接受 T 细胞衔接双特异性抗体 glofitamab 治疗的患者组成。
我们鉴定出一种与显著更差的总生存期(OS;log-rank P = 0.016)相关的"高耗竭"亚型。基于此,我们开发了一个五基因免疫耗竭相关预后评分(IERPS),该评分在多个队列中均可作为不良OS的稳健独立预测因子。关键的是,在一个由256例复发/难治患者组成的队列中,IERPS在标准治疗(SOC)组中对无事件生存期(EFS)具有强烈的预后价值(HR = 2.02,95%置信区间[95% CI]:1.07-3.81,P = 0.029),但在CAR-T 组中失去预后意义(HR = 0.70,95% CI:0.35-1.40,P = 0.314)。这一显著的交互作用提示,CAR-T 细胞治疗可能消除高IERPS相关的不良预后。在生物学层面,探索性单细胞分析(n = 4个样本)通过经典T细胞耗竭的标志特征界定了高IERPS状态,并且一项描述性病例研究显示该评分可动态追踪对glofitamab的临床反应。
The tumor microenvironment (TME) is a key determinant of prognosis in diffuse large B-cell lymphoma (DLBCL). While T-cell exhaustion is implicated in therapeutic failure, its precise molecular hallmarks and utility for predicting response to modern immunotherapies, such as chimeric antigen receptor (CAR)-T cell therapy, remain unclear.
We performed an integrative analysis of transcriptomic and clinical data from multiple DLBCL cohorts (The Cancer Genome Atlas [TCGA], GSE181063, GSE10846, GSE248835, GSE182434). We used unsupervised clustering, exploratory analysis of single-cell RNA sequencing data, and the least absolute shrinkage and selection operator for variable selection (LASSO-Cox) regression to characterize the exhausted TME, construct a prognostic model, and evaluate its predictive value for CAR-T cell therapy. The model's dynamic behavior was assessed in a proof-of-concept longitudinal cohort of patients treated with the T-cell-engaging bispecific antibody glofitamab.
We identified a "high-exhaustion" subtype associated with significantly poorer overall survival (OS; log-rank P = 0.016). Based on this, we developed a five-gene immune exhaustion-Related Prognostic Score (IERPS) that served as a robust independent predictor of poor OS across multiple cohorts. Critically, in a cohort of 256 relapsed/refractory patients, the IERPS was strongly prognostic for event-free survival (EFS) in the standard-of-care (SOC) arm (HR = 2.02, 95% confidence interval [95% CI]: 1.07-3.81, P = 0.029) but lost prognostic significance in the CAR-T arm (HR = 0.70, 95 % CI: 0.35-1.40, P = 0.314). This significant interaction suggests that CAR-T cell therapy may abrogate the poor prognosis associated with a high IERPS. Biologically, exploratory single-cell analysis ( n = 4 samples) defined the high-IERPS state by hallmarks of classical T-cell exhaustion, and a descriptive case study showed the score dynamically tracked clinical response to glofitamab.
A state of active T-cell exhaustion and a suppressive TME drive the adverse immune phenotype in DLBCL. Our IERPS model captures this dysfunctional state, acting as a powerful prognostic tool and, more importantly, as a potential predictive biomarker to identify high-risk patients who appear to overcome their inherently poor prognosis through CAR-T cell therapy.
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