RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
肿瘤细胞治疗研究
英文原题:Targeting macrophage-associated core genes for prognostic prediction and therapeutic insights in bladder cancer.
Targeting macrophage-associated core genes for prognostic prediction and therapeutic insights in bladder cancer.
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本研究强调了 MRGs 对膀胱癌 TME 的关键影响,并构建了一个具有中等预测性能的风险预测模型,该模型可能有助于患者分层,但仍需在独立队列中进一步验证。
本研究旨在探讨巨噬细胞相关基因(MRGs)在膀胱癌免疫微环境中的作用,并探索其在预后预测和治疗决策中的潜在价值。
本研究整合了来自 TCGA 和 GEO 数据库的膀胱癌转录组数据以及单细胞 RNA 测序(scRNA-seq)数据,以系统性地识别关键 MRGs。差异表达分析、加权基因共表达网络分析(WGCNA)和单细胞测序分析用于筛选核心 MRGs。LASSO Cox 回归分析的结果用于构建生存风险预测模型,并评估该模型的预测准确性。此外,对核心 MRGs 进行了免疫细胞浸润和药物敏感性分析,以阐明其在免疫调节和治疗反应中的作用。进一步,使用 PCR、Western blot 和免疫组化对预后模型中的关键基因进行了验证。
本研究识别出11个与巨噬细胞显著相关的核心基因,并基于ANXA1、ST3GAL5和VIM构建了风险预测模型。该模型在所有样本中表现出中等的预测性能(AUC = 0.682),提示其可能用于患者分层。免疫分析显示,高风险患者呈现出明显的免疫抑制性肿瘤微环境(TME),其特征为M2巨噬细胞和中性粒细胞浸润增加,同时CD8⁺ T细胞和NK细胞等效应免疫细胞显著减少。此外,高风险患者对靶向治疗表现出更高的敏感性,但对常规化疗的敏感性降低。根据体外和体内实验,ST3GAL5过表达显著促进膀胱癌细胞增殖和肿瘤生长,凸显其在肿瘤进展中的潜在作用。
The study aims at investigating the function of macrophage-related genes (MRGs) within the bladder cancer immune microenvironment and exploring their potential value in prognosis prediction and therapeutic decision-making. METHOD: This study integrated bladder cancer transcriptomic data from the TCGA and GEO databases along with single-cell RNA sequencing (scRNA-seq) data to systematically identify key MRGs. Differential expression analysis, weighted gene co-expression network analysis (WGCNA), and single-cell sequencing analysis served for screening for core MRGs. The results from LASSO Cox regression analysis were used for constructing a survival risk prediction model, together with the evaluation of the model's predictive accuracy. Besides, core MRGs were subjected to immune cell infiltration and drug sensitivity analyses for the elucidation of their roles in immune regulation and therapeutic response. Furthermore, key genes in the prognostic model were validated using PCR, Western blot, and immunohistochemistry. RESULT: This study identified 11 core genes significantly associated with macrophages and developed a risk prediction model based on ANXA1, ST3GAL5, and VIM. The model demonstrated moderate predictive performance across all samples (AUC = 0.682), indicating potential utility for patient stratification. Immune analysis revealed that high-risk patients exhibited a distinctly immunosuppressive tumor microenvironment (TME), characterized by increased infiltration of M2 macrophages and neutrophils, along with a significant reduction in effector immune cells of CD8⁺ T cells and NK cells. Additionally, high-risk patients displayed greater sensitivity to targeted therapies but reduced sensitivity to conventional chemotherapy. According to in vitro and in vivo experiments, ST3GAL5 overexpression significantly promoted bladder cancer cell proliferation and tumor growth, underscoring its potential role in tumor progression.
This study highlights the crucial impact of MRGs on the TME of bladder cancer and constructs a risk prediction model with moderate predictive performance that may assist in patient stratification, although further validation in independent cohorts is required.
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