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肿瘤免疫类型的空间分辨单细胞图谱揭示干扰素信号与浆细胞样树突状细胞在三阴性乳腺癌中的核心作用

英文原题:Spatially resolved single-cell landscape of tumor immunotypes reveals the central role of interferon signaling and plasmacytoid dendritic cells in triple-negative breast cancer.

查看英文原题

Spatially resolved single-cell landscape of tumor immunotypes reveals the central role of interferon signaling and plasmacytoid dendritic cells in triple-negative breast cancer.

PubMed 2026/06/03(内容时间) J Immunother Cancer Q1 · IF 11.7(JCR 2025)

研究概要

我们的研究强调,pDC 和 IFN 信号是三阴性乳腺癌(TNBC)中有效抗肿瘤免疫的标志。

中文摘要

背景:TIL(肿瘤浸润淋巴细胞)是乳腺癌临床结局的重要决定因素。由于评分较容易且观察者间一致性较高,临床通常评估基质 TIL(sTIL);但上皮内 TIL 可能提供有关抗肿瘤免疫的额外信息。本研究旨在全面描绘三阴性乳腺癌(TNBC)中与免疫类型相关的细胞图谱,并确定与临床结局相关的特征。方法:依据免疫浸润的位置和密度,将212例 TNBC 肿瘤分为免疫荒漠(ID)、免疫排斥(IE)和免疫炎症(IN)三种免疫类型。对75例肿瘤开展单细胞空间转录组分析,以界定不同免疫类型下肿瘤微环境的细胞组成和功能状态;并结合 FinXX、CALGB-40603、I-SPY 2 及真实世界临床基因组数据(RWCGD)队列的 bulk RNA 测序数据和临床结局进行验证与整合。结果:与 ID 肿瘤患者相比,IN 肿瘤患者的临床结局显著更好。尽管 sTIL 丰富,IE 肿瘤患者的结局仍与 ID 肿瘤患者相近。单细胞空间分析显示,与 IN 肿瘤相比,ID 和 IE 肿瘤的主要组织相容性复合体 I/II 表达降低,肿瘤驻留浆细胞样树突状细胞(pDC)数量较少;IN 肿瘤则富集干扰素-α(IFN-α)和干扰素-γ(IFN-γ)应答。多个独立数据集中,高 IFN 应答评分均与较好结局相关。对 RWCGD bulk RNA-seq 数据进行去卷积分析证实,pDC 丰度仅在激素受体阴性亚型中与较好结局相关。结论:本研究指出,pDC 和 IFN 信号是 TNBC 有效抗肿瘤免疫的标志。基于免疫类型的分析显示,在免疫排斥型肿瘤中单独使用 sTIL 的预后价值有限,并支持将 pDC 和 IFN 通路作为预后及治疗开发的潜在生物标志物。

展开英文摘要原文

BACKGROUND: Tumor-infiltrating lymphocytes (TILs) are established determinants of clinical outcomes in breast cancer. 1-6 While stromal TILs (sTILs) are commonly evaluated due to easier scoring and higher interobserver reproducibility, intraepithelial TILs may provide additional insights into anti-tumor immunity. 7 We aimed to comprehensively characterize immunotype-associated cellular landscapes in triple-negative breast cancer (TNBC) and identify features associated with clinical outcomes. METHODS: 212 TNBC tumors were classified into three immunotypes based on immune infiltrate location and density: immune desert (ID), immune excluded (IE), and immune inflamed (IN). 8 Single-cell spatial transcriptomics was performed on 75 tumors to define the cellular composition and functional states of the tumor microenvironment across immunotypes. Findings were validated and integrated with bulk RNA sequencing data and clinical outcome datasets from FinXX, CALGB-40603, I-SPY 2, and Real-World Clinico-Genomic Data (RWCGD) cohorts. RESULTS: Patients with IN tumors had significantly improved outcomes compared with ID tumors. Despite high sTILs, IE tumors showed poor outcomes similar to ID tumors. Single-cell spatial analysis revealed that ID and IE tumors exhibited reduced major histocompatibility complex I/II expression and fewer tumor-resident plasmacytoid dendritic cells (pDCs) compared with IN tumors, which were enriched for interferon-alpha (IFN ) and interferon-gamma (IFN ) responses. High IFN response scores were associated with favorable outcomes across multiple therapy types in independent datasets. Deconvolution of RWCGD bulk RNA-seq data confirmed that pDC abundance correlated with improved outcomes specifically in hormone receptor-negative subtypes. CONCLUSIONS: Our study highlights pDCs and IFN signaling as hallmarks of effective anti-tumor immunity in TNBC. Immunotype-based profiling underscores the limited prognostic value of sTILs alone in immune-excluded tumors and supports pDCs and IFN pathways as potential biomarkers for prognosis and therapeutic development in TNBC.

论文信息

作者
Liu Y、Carter JM、Ma Y、Deshmukh SK、Sledge GW Jr、Balko JM、Kachergus JM、Shi J
第一作者单位
Department of Quantitative Health Sciences, Mayo Clinic in Florida, Jacksonville, Florida, USA chumsri.saranya@mayo.edu Liu.Yi1@mayo.edu.United States
通讯作者单位
Department of Hematology and Oncology, Mayo Clinic in Florida, Jacksonville, Florida, USA chumsri.saranya@mayo.edu Liu.Yi1@mayo.edu.United States
期刊
Journal for immunotherapy of cancer2026 Jun 3
原文标识
PubMed 42236117 · DOI 10.1136/jitc-2025-014020