RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Immunometabolic Dysregulation in B-Cell Acute Lymphoblastic Leukemia Revealed by Single-Cell RNA Sequencing: Perspectives on Subtypes and Potential Therapeutic Targets.
Immunometabolic Dysregulation in B-Cell Acute Lymphoblastic Leukemia Revealed by Single-Cell RNA Sequencing: Perspectives on Subtypes and Potential Therapeutic Targets.
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B细胞急性淋巴细胞白血病(B-ALL)的特征是骨髓(BM)中B系淋巴细胞的异常增殖。BM微环境中免疫细胞的作用仍未完全阐明。单细胞RNA测序(scRNA-seq)为深入理解B-ALL的发病机制提供了突破性见解的潜力。
在本研究中,对17例B-ALL患者(B-ALL队列)和13例健康对照(HCs)的BM样本进行了scRNA-seq。生物信息学分析,包括聚类、差异表达、通路分析和基因集变异分析,系统性地鉴定了免疫细胞类型,并评估了T细胞预后和代谢异质性。开发了一种基于代谢特征的机器学习模型用于B-ALL亚型分型。
此外,进行了T细胞-单核细胞相互作用、转录因子(TF)活性和药物富集分析,以确定治疗靶点。结果表明,B-ALL患者中Pro-B细胞显著增加,同时B细胞、NK细胞、单核细胞和浆细胞样树突状细胞(pDCs)减少,提示免疫功能障碍。临床预后与T细胞亚群的分布显著相关。代谢异质性将患者分为四个不同的组(A-D),所有组均表现出增强的主要组织相容性I类(MHC-I)介导的细胞间通讯。基于代谢的机器学习模型实现了B-ALL组的精确分类。TF活性分析强调了MYC、STAT3和TCF7在B-ALL免疫代谢网络中的关键作用。药物靶向研究表明,dorlimomab aritox 和 palbociclib 分别特异性靶向核糖体通路和 CDK4/6 通路的失调,提供了新的治疗途径。
本研究阐明了 B-ALL 中的免疫代谢失调,其特征为细胞组成改变、代谢紊乱及细胞间异常相互作用。识别了关键 TFs,并建立了靶向药物谱,证明将免疫机制与代谢调控相结合用于治疗 B-ALL 具有显著的临床潜力。
B-cell acute lymphoblastic leukemia (B-ALL) is characterized by the abnormal proliferation of B-lineage lymphocytes in the bone marrow (BM). The roles of immune cells within the BM microenvironment remain incompletely understood. Single-cell RNA sequencing (scRNA-seq) provides the potential for groundbreaking insights into the pathogenesis of B-ALL.
In this study, scRNA-seq was conducted on BM samples from 17 B-ALL patients (B-ALL cohorts) and 13 healthy controls (HCs). Bioinformatics analyses, including clustering, differential expression, pathway analysis, and gene set variation analysis, systematically identified immune cell types and assessed T-cell prognostic and metabolic heterogeneity. A metabolic-feature-based machine learning model was developed for B-ALL subtyping.
Furthermore, T-cell-monocyte interactions, transcription factor (TF) activity, and drug enrichment analyses were performed to identify therapeutic targets. The results indicated significant increases in Pro-B cells, alongside decreases in B cells, NK cells, monocytes, and plasmacytoid dendritic cells (pDCs) among B-ALL patients, suggesting immune dysfunction. Clinical prognosis correlated significantly with the distribution of T-cell subsets.
Metabolic heterogeneity categorized patients into four distinct groups (A-D), all exhibiting enhanced major histocompatibility class I (MHC-I)-mediated intercellular communication. The metabolic-based machine learning model achieved precise classification of B-ALL groups.
Analysis of TF activity underscored the critical roles of MYC, STAT3, and TCF7 within the B-ALL immunometabolic network. Drug targeting studies revealed that dorlimomab aritox and palbociclib specifically target dysregulation in ribosomal and CDK4/6 pathways, offering novel therapeutic avenues.
This study elucidates immunometabolic dysregulation in B-ALL, characterized by altered cellular composition, metabolic disturbances, and abnormal cellular interactions. Key TFs were identified, and targeted drug profiles were established, demonstrating the significant clinical potential of integrating immunological mechanisms with metabolic regulation for the treatment of B-ALL.
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