γδ T 细胞调节小细胞肺癌中的抗肿瘤免疫
γδ T cells modulate anti-tumor immunity in small cell lung cancer.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Multi-omics analysis and metastasis risk factor prediction in N1b stage PTMC: insights into immune infiltration and therapeutic implications.
Multi-omics analysis and metastasis risk factor prediction in N1b stage PTMC: insights into immune infiltration and therapeutic implications.
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本研究构建了一个稳健的 N1b 期 PTMC 转移预测列线图,并通过整合多组学分析鉴定了转移相关分子驱动因素。对全身免疫和肿瘤浸润免疫的全面分析揭示了关键的抗肿瘤免疫改变。这些发现为早期转移表型检测建立了框架,可能启发相关的免疫治疗假说。
甲状腺微小乳头状癌(PTMC)伴侧颈淋巴结受累表现出一种看似惰性但高度侵袭性的表型,其特征为早期播散和肿瘤生长缓慢。全面理解多组学图谱、循环免疫特征和肿瘤免疫微环境的整合,对于更准确的监测和个体化治疗策略至关重要。
对638例PTMC患者的临床特征和循环免疫炎症标志物进行分析,采用多因素回归和最小绝对收缩和选择算子(LASSO)回归识别与N1b相关的风险指标。通过10折交叉验证训练了八种监督机器学习模型,以选择最优分类器。加权基因共表达网络分析(WGCNA)结合机器学习从整合的RNA-seq图谱中识别转移相关基因模块,进而构建多层感知器基因分类器。采用基因组分析研究特征基因中的突变、拷贝数改变和甲基化修饰,随后筛选抗肿瘤药物并进行对接模拟以探索其治疗潜力。CIBERSORT结合免疫组化用于研究N1b期PTMC病灶中的免疫浸润和功能变化。
开发了两个临床转移风险模型,模型A基于中性粒细胞与淋巴细胞比值(NLR),模型B基于淋巴细胞和中性粒细胞计数,其中模型A表现出更优的泛化能力(AUC = 0.852)和区分性能。NLR是N1b期PTMC的独立危险决定因素(OR = 2.12,p < 0.01)。转录组分析揭示了一个隐匿性侧颈淋巴结转移的分子特征(ALDH1A3、CTXN1、MGAT3和TMEM163),表现出很强的稳健性(AUC = 0.857)。特征基因主要与细胞黏附、细胞间信号传导和KRAS失调通路相关。CTXN1、MGAT3和TMEM163的低甲基化可能是转录激活的基础。N1b期肿瘤表现出CD8+ T细胞和滤泡辅助性T细胞浸润减少,但树突状细胞、γδ T细胞和活化CD4+记忆T细胞增加,提示免疫逃逸和代偿性免疫激活。
Papillary thyroid microcarcinoma (PTMC) with lateral neck lymph node involvement exhibits a deceptively indolent yet highly invasive phenotype, characterized by early dissemination and slow tumor growth. A comprehensive understanding of integrating multiomics landscapes, circulating immune profiles, and tumor immune microenvironment is essential for more accurate surveillance and tailored therapeutic strategies.
Clinical profile and circulating immune-inflammatory markers from 638 PTMC patients were analyzed using multivariate and least absolute shrinkage and selection operator (LASSO) regression to recognize N1b-associated risk indicators. Eight supervised machine learning models were trained via 10-fold cross-validation to select the optimal classifier. Weighted gene coexpression network analysis (WGCNA) alongside machine learning identified metastasis-related gene modules from the integrated RNA-seq profile, leading to a multilayer perceptron gene classifier. Genomic profiling was employed to investigate mutations, copy number alterations, and methylation modifications in signature genes, followed by screening of antineoplastic drugs and docking simulations to explore their therapeutic potential. CIBERSORT, combined with immunohistochemistry, was used to investigate immune infiltration and functional changes in N1b-stage PTMC lesions.
Two clinical metastasis risk models were developed, with Model A based on the neutrophil-to-lymphocyte ratio (NLR) and Model B on lymphocyte and neutrophil counts, where Model A showed superior generalization (AUC = 0.852) and discriminative performance. NLR was an independent risk determinant for N1b-stage PTMC (OR = 2.12, p < 0.01). Transcriptomic profiling revealed a molecular signature ( ALDH1A3 , CTXN1 , MGAT3 , and TMEM163 ) of occult lateral lymph node metastasis, exhibiting strong robustness (AUC = 0.857). Signature genes were predominantly associated with cell adhesion, intercellular signaling, and KRAS dysregulation pathways. Hypomethylation of CTXN1 , MGAT3 , and TMEM163 may underlie transcriptional activation. N1b-stage tumors exhibited reduced CD8+ T and T follicular helper cell infiltration but increased dendritic, γδ T, and activated CD4+ memory T cells, suggesting immune evasion and compensatory immune activation. DISCUSSION: This study constructed a robust metastasis prediction nomogram for N1b-stage PTMC and identified metastasis-associated molecular drivers through integrative multiomics analysis. Comprehensive profiling of systemic and tumor-infiltrating immunity revealed key antitumor immune alterations. These findings establish a framework for early metastatic phenotype detection, potentially inspiring relevant immunotherapeutic hypotheses.
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