RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Identifying an immunogenic cell death-related gene signature and HSPA6 infers adverse prognosis in acute myeloid leukemia.
Identifying an immunogenic cell death-related gene signature and HSPA6 infers adverse prognosis in acute myeloid leukemia.
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免疫原性细胞死亡(ICD)是一种特定形式的调节性细胞死亡,可启动适应性免疫应答。我们旨在探讨免疫原性细胞死亡相关基因(ICDGs)在AML中的意义,采用生物信息学分析、共识聚类、功能富集分析以及细胞系和动物模型中的实验验证相结合的方法。
在此,我们鉴定了34个ICDGs,单细胞分析表明CD8+ T细胞和NK细胞表现出与ICD密切相关的基因表达模式。共识聚类揭示了AML的两种不同亚型(ICD-high和ICD-low),前者与更有利的临床结局和免疫细胞浸润增加相关。通过LASSO回归建立了预测模型,产生了一个包含六个关键ICDGs(FGFBP2、GZMB、ALPK2、NELL2、OPTN、FCGR2B)的风险特征,该特征能够根据总生存期结局成功将患者分为高风险和低风险队列。
值得注意的是,HSPA6成为一个关键ICDG,其在OCI-AML3细胞中的敲低显著抑制增殖并诱导凋亡,提示其作为治疗靶点的潜力。
总之,我们的研究强调了ICD相关基因在预测AML预后中的重要性,并初步开发了一个预后风险特征,可能为个性化治疗策略铺平道路,同时强调需要进一步验证和探索HSPA6在AML中的作用。
Immunogenic cell death (ICD) represents a specific form of regulatory cell death that initiates an adaptive immune response.
We aimed to investigate the significance of immunogenic cell death-related genes (ICDGs) in AML, utilizing a combination of bioinformatics analysis, consensus clustering, functional enrichment analysis, and experimental validation in cell lines and animal models.
Here, we identified 34 ICDGs, and single-cell analysis indicated that CD8 + T cells and NK cells exhibited gene expression patterns closely associated with ICD. Consensus clustering revealed two distinct subtypes of AML (ICD-high and ICD-low), with the former correlating with more favorable clinical outcomes and heightened infiltration of immune cells.
A predictive model was established through LASSO regression, yielding a risk signature comprising six key ICDGs (FGFBP2, GZMB, ALPK2, NELL2, OPTN, FCGR2B), which successfully categorizes patients into high-risk and low-risk cohorts based on overall survival outcomes.
Notably, HSPA6 emerged as a critical ICDG, with its knockdown in OCI-AML3 cells significantly inhibiting proliferation and inducing apoptosis, suggesting its potential as a therapeutic target. In summary, our research emphasizes the importance of ICD-related genes in predicting the prognosis of AML and initiates the development of a prognostic risk signature that may pave the way for personalized treatment strategies while highlighting the need for further validation and exploration of HSPA6 in AML.
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