单细胞追踪揭示黑色素瘤 TIL 治疗过程中肿瘤反应性 T 细胞的可塑性
Single-cell tracking reveals tumor-reactive T cell plasticity during melanoma TIL therapy.
TIL(肿瘤浸润淋巴细胞)过继细胞治疗可在转移性黑色素瘤中诱导持久缓解,然而在体外扩增过程中及回输后,调控肿瘤反应性T细胞命运的克隆和转录动态仍知之甚少。
英文原题:De novo-designed pMHC binders facilitate T cell-mediated cytotoxicity toward cancer cells.
De novo-designed pMHC binders facilitate T cell-mediated cytotoxicity toward cancer cells.
CD8+ T细胞通过T细胞受体(TCRs)识别细胞内抗原,对于抵抗感染和癌症的适应性免疫至关重要。
CD8+ T 细胞通过 T 细胞受体(TCR)识别细胞内抗原,是抗感染和抗肿瘤适应性免疫的核心。然而,从患者材料中鉴定 TCR 仍然复杂。我们提出了一种快速从头设计 minibinder(miBd)的平台,利用最先进的生成模型来设计靶向癌症相关肽结合主要组织相容性复合体(pMHC)SLLMWITQC/HLA-A*02:01(NY-ESO-1)的 miBd。整合计算机交叉泛筛(in silico cross-panning)实现了对特异性的计算预筛选,分子动力学模拟则提高了体外成功率的可预测性。我们鉴定出一种高亲和力 NY-ESO-1 binder,并使用冷冻电子显微镜确认了其结构,将其整合入嵌合抗原受体后,可诱导对 NY-ESO-1+ 黑色素瘤细胞的杀伤。我们进一步设计并验证了针对结构未知的新抗原 pMHC 复合物 RVTDESILSY/HLA-A*01:01 的 binder,展示了精准免疫治疗的潜力。
The recognition of intracellular antigens by CD8 + T cells through T cell receptors (TCRs) is central for adaptive immunity against infections and cancer. However, the identification of TCRs from patient material remains complex. We present a rapid de novo minibinder (miBd) design platform leveraging state-of-the-art generative models to engineer miBds targeting the cancer-associated peptide-bound major histocompatibility complex (pMHC) SLLMWITQC/HLA-A*02:01 (NY-ESO-1). Incorporating in silico cross-panning enabled computational prescreening of specificity, and molecular dynamics simulations allowed for improved predictability of in vitro success. We identified a high-affinity NY-ESO-1 binder and confirmed its structure using cryo-electron microscopy, which, when incorporated in a chimeric antigen receptor, induced killing of NY-ESO-1 + melanoma cells. We further designed and validated binders to a neoantigen pMHC complex, RVTDESILSY/HLA-A*01:01, with unknown structure, demonstrating the potential for precision immunotherapy.
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