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单细胞和批量转录组学综合分析确定调节性 T 细胞特征可作为弥漫性大 B 细胞淋巴瘤的预后预测因子

英文原题:Comprehensive Analysis of Single-Cell and Bulk Transcriptomics Identified Regulatory T-Cell Features as Predictors of Prognosis in Diffuse Large B-Cell Lymphoma.

查看英文原题

Comprehensive Analysis of Single-Cell and Bulk Transcriptomics Identified Regulatory T-Cell Features as Predictors of Prognosis in Diffuse Large B-Cell Lymphoma.

PubMed 2025/03/01(内容时间) Hematol Oncol Q1 · IF 4.1(JCR 2025)

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中文摘要

弥漫性大B细胞淋巴瘤(DLBCL)是一种在生物学和临床上具有异质性的恶性肿瘤。转录组学和遗传学分析的进展显著增强了我们对疾病内在发病机制的理解,揭示了众多潜在的治疗靶点。

然而,肿瘤浸润性调节性T细胞(Tregs)对DLBCL预后的影响仍存在争议。在此,我们通过整合单细胞和批量转录组数据,开发了一个Treg相关基因特征,以预测接受标准免疫化疗的DLBCL患者的预后。共鉴定出227个Treg特征基因,其中6个被选用于构建预后特征。在NCICCR和验证队列中,具有高风险评分的DLBCL患者生存结局显著差于低风险评分患者。PIM1、MYD88、DTX1、CARD11、CD79B、ETV6、BCL6和CDKN2A的突变主要见于高风险组,而TNFRSF14和DNMT3A的改变在低风险组中更常被检测到。免疫浸润分析显示,高风险组表现出免疫抑制性微环境,而低风险组在肿瘤微环境(TME)中显示出更高丰度的非细胞成分。

最后,Treg特征基因TNFRSF25和SELL能有效预测对Axicabtagene Ciloleucel(Axi-cel)治疗的长期反应。

总之,我们的研究通过整合单细胞和批量转录组学,开发了一个由6个Treg特征基因组成的预后特征,用于预测DLBCL患者的临床结局。该风险特征与免疫学特征显著相关。

展开英文摘要原文

Diffuse large B-cell lymphoma (DLBCL) is a biologically and clinically heterogeneous malignancy. Advances in transcriptomic and genetic profiling have significantly enhanced our understanding of the disease's intrinsic pathogenesis, uncovering numerous potential therapeutic targets.

However, the impact of tumor-infiltrating Regulatory T cells (Tregs) on the prognosis of DLBCL remains controversial.

Here, we developed a Treg-associated gene signature by integrating single-cell and bulk transcriptome data to predict the prognosis of DLBCL patients receiving standard immunochemotherapy. In total, 227 Tregs feature genes were identified, six of which were selected for constructing a prognostic signature. DLBCL patients possessing high-risk scores had significantly poorer survival outcomes than those who possess low-risk scores in NCICCR and validation cohorts.

Mutations in PIM1, MYD88, DTX1, CARD11, CD79B, ETV6, BCL6, and CDKN2A were predominantly observed in the high-risk group, whereas alterations in TNFRSF14 and DNMT3A were more frequently detected in the low-risk group. Immune infiltration analysis revealed that the high-risk group exhibited an immunosuppressive microenvironment, whereas the low-risk group showed a higher abundance of non-cellular components in the tumor microenvironment (TME).

Finally, the Treg features TNFRSF25 and SELL can effectively predict long-term responses to Axicabtagene Ciloleucel (Axi-cel) treatment. In summary, our study developed a prognostic signature consisting of six Treg feature genes by integrating single-cell and bulk transcriptomics to predict clinical outcomes in DLBCL patients. The risk signature was significantly associated with immunological characteristics.

论文信息

作者
Cui Y、Hu G、Han X、Li W、Wang X、Qian Z、Li L、Qiu L
单位
Department of Lymphoma and National Key Laboratory of Druggability Evaluation and Systematic Translational Medicine, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, the Sino-US Center for Lymphoma and Leukemia Research, Tianjin, China.China
期刊
Hematological oncology2025 Mar
原文标识
PubMed 40041930 · DOI 10.1002/hon.70050