下一代肿瘤不可知靶点即将出现
Next-generation tumor-agnostic targets on the horizon.
肿瘤不可知药物开发将肿瘤学重新聚焦于共享的分子依赖性而非组织来源,从而能够针对跨肿瘤的罕见可操作驱动因素进行高效开发。
英文原题:RREB1 could act as an immunological and prognostic biomarker: From comprehensive analysis to osteosarcoma validation.
RREB1显示出作为某些癌症预后标志物的潜力,并可能预测免疫治疗的疗效。此外,RREB1表达与免疫相关标志物相关,表明其在特定肿瘤的预后和预测免疫微环境治疗反应中发挥作用。
Ras应答元件结合蛋白1(RREB1)是一种参与多种生物学过程的转录因子。值得注意的是,RREB1通过调控肿瘤相关基因表达、塑造肿瘤微环境以及调节免疫检查点,在肿瘤免疫中发挥作用。鉴于这些功能,RREB1已成为肿瘤免疫治疗中一个潜在的调控靶点。然而,目前尚缺乏一项全面评估RREB1预后价值及其在调节免疫微环境中作用的泛癌分析,有必要进一步研究,以更好地理解其在不同癌症类型中的机制及其对个体化免疫治疗的意义。
我们利用TCGA数据库的RNA测序数据分析了RREB1在33种癌症类型中的表达。进一步使用cBioPortal数据库对RREB1的改变进行了表征。利用TCGA临床数据评估了临床和病理特征以及预后意义。使用CIBERSORT和ESTIMATE算法评估了RREB1在肿瘤微环境中的参与情况。采用Spearman秩相关系数研究了RREB1表达与肿瘤突变负荷(TMB)以及微卫星不稳定性(MSI)之间的关系。应用GSEA探索RREB1的生物学功能。此外,我们评估了RREB1表达与PD-1/PD-L1抑制剂疗效之间的联系。最后,进行了一系列体外实验以评估RREB1表达对骨肉瘤(OS)和肺癌细胞系恶性行为的影响。
RREB1在多种癌症类型中过表达,并与患者预后相关。RREB1表达与TMB、MSI和免疫细胞浸润(包括调节性T细胞、CD8+ T细胞和巨噬细胞)强烈相关。此外,RREB1表达与免疫应答和免疫治疗疗效相关。体外实验表明,敲低RREB1显著抑制OS细胞的增殖和迁移。
BACKGROUND: The Ras-responsive element binding protein 1 (RREB1) is a transcription factor involved in various biological processes. Notably, RREB1 plays a role in tumor immunity by regulating tumor-related gene expression, shaping the tumor microenvironment, and modulating immune checkpoints. Given these functions, RREB1 has emerged as a potential regulatory target in tumor immunotherapy. However, a comprehensive pan-cancer analysis evaluating RREB1's prognostic value and its role in modulating the immune microenvironment remains unexplored, warranting further investigation to better understand its mechanisms across different cancer types and its implications for personalized immunotherapy. METHODS: We analyzed RREB1 expression across 33 cancer types using RNA sequencing data from the TCGA database. RREB1 alterations were further characterized using the cBioPortal database. Clinical and pathological features, along with prognostic significance, were assessed using TCGA clinical data. The involvement of RREB1 in the tumor microenvironment was evaluated using the CIBERSORT and ESTIMATE algorithms. Relationships between RREB1 expression and tumor mutation burden (TMB), as well as microsatellite instability (MSI), were investigated using Spearman's rank correlation coefficient. GSEA was applied to explore the biological functions of RREB1. Additionally, we assessed the link between RREB1 expression and the efficacy of PD-1/PD-L1 inhibitors. Finally, a series of in vitro experiments were performed to evaluate the impact of RREB1 expression on the malignant behavior of osteosarcoma (OS) and lung cancer cell lines. RESULTS: RREB1 was overexpressed in several cancer types and correlated with patient prognosis. RREB1 expression was strongly associated with TMB, MSI, and immune cell infiltration, including regulatory T cells, CD8 + T cells, and macrophages. Furthermore, RREB1 expression was linked to immune responses and the efficacy of immunotherapy. In vitro experiments demonstrated that knockdown of RREB1 significantly inhibited the proliferation and migration of OS cells. CONCLUSIONS: RREB1 shows potential as a prognostic marker for certain cancers and may predict the efficacy of immunotherapy. Additionally, RREB1 expression is related to immune-related markers, suggesting its role in prognosis and predicting responses to immune microenvironment therapies in specific tumors.
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