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NK 细胞相关预后模型刻画弥漫大 B 细胞淋巴瘤的免疫景观与治疗疗效

英文原题:Natural killer cell-associated prognosis model characterizes immune landscape and treatment efficacy of diffuse large B cell lymphoma.

查看英文原题

Natural killer cell-associated prognosis model characterizes immune landscape and treatment efficacy of diffuse large B cell lymphoma.

PubMed 2024/08/07(内容时间) Cytokine Q2 · IF 3.6(JCR 2025)

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研究概要

NK 细胞相关基因特征被证明是 DLBCL 患者免疫治疗成功与否的可靠指标,从而提供了一种独特的评估方法。

研究思路结论见上方概要

NK细胞对于癌症的检测、识别和预测至关重要。然而,迄今为止,尚无基于NK细胞相关基因的预后风险模型来预测DLBCL患者的预后和治疗结局。本研究旨在探索一种能够准确预测DLBCL预后和治疗疗效的风险评估模型。

对GEO数据库中DLBCL样本的表达谱进行了生物信息学分析。采用Cox回归和LASSO回归分析确定与患者预后相关的NK细胞相关基因。基于这些基因,构建了风险评估模型,以预测患者预后和治疗有效性。最后,采用qRT-PCR验证临床样本中基因标签的表达。

我们确定了七个与预后相关的NK细胞相关基因(MAP2K1、PRKCB、TNFRSF10B、IL18、LAMP1、RASGRP1和SP110),并基于这些基因将DLBCL患者分为低危组和高危组。生存分析显示,低危组患者的预后更好。通路富集分析显示,两个风险组之间的差异表达基因与免疫应答通路相关。与高危组相比,低危组肿瘤组织中的免疫细胞浸润更高。此外,与高危组相比,低危患者接受免疫治疗或其他常用抗肿瘤药物治疗后可能具有更好的疗效。另外,qRT-PCR显示,与对照样本相比,大多数DLBCL样本中风险基因包括TNFRSF10B、IL18和LAMP1的表达显著升高,而保护基因包括MAP2K1、PRKCB、RASGRP1和SP110的表达显著降低。

展开英文摘要原文

NK cells are essential for the detection, identification and prediction of cancer. However, so far, there is no prognostic risk model based on NK cell-related genes to predict the prognosis and treatment outcome of DLBCL patients. This study aimed to explore a risk assessment model that could accurately predict the prognosis and treatment efficacy of DLBCL.

Bioinformatics analysis of the expression profiles of DLBCL samples in the GEO database was performed. Cox regression and LASSO regression analysis were used to determine NK cell-related genes associated with patient's prognosis. Based on these genes, a risk assessment model was constructed to predict the prognosis of patients and the effectiveness of treatment. Finally, qRT-PCR was used to verify the expression of gene tags in clinical samples.

We identified seven prognosis-related NK cell-related genes (MAP2K1, PRKCB, TNFRSF10B, IL18, LAMP1, RASGRP1, and SP110), and DLBCL patients were divided into low- and high-risk groups based on these genes. Survival analysis showed that the prognosis of patients with low-risk group was better. Pathway enrichment analysis showed that the differentially expressed genes between the two risk groups were related to immune response pathways. Compared with the high-risk group, the low-risk group had higher infiltration of immune cells in tumor tissues. Besides, compared with high-risk group, low-risk patients by immunotherapy or other commonly used anti-tumor drugs might have better efficacy after treatment. In addition, qRT-PCR showed that the expression of risk genes including TNFRSF10B, IL18 and LAMP1 were significantly increased in most DLBCL samples compared to control samples, while the expression of protective genes including MAP2K1, PRKCB, RASGRP1 and SP110 were significantly decreased.

The NK cell-related gene signatures were proved to be a reliable indicator of the success of immunotherapy in patients with DLBCL, thus providing a unique evaluation method.

论文信息

作者
Xiao W、Yu K、Deng X、Zeng Y
第一作者单位
Department of Hematology, The Seventh Affiliated Hospital, Sun Yat-sen University, No. 628 Zhenyuan Road, Guangming District, Shenzhen 518107, Guangdong Province, China.China
通讯作者单位
Department of Hematology, The Seventh Affiliated Hospital, Sun Yat-sen University, No. 628 Zhenyuan Road, Guangming District, Shenzhen 518107, Guangdong Province, China. Electronic address: zengyunxin@sysush.com.China
文献类型
非美国政府资助研究
期刊
Cytokine2024 Oct
原文标识
PubMed 39111113 · DOI 10.1016/j.cyto.2024.156726