CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Immune checkpoint therapy responders display early clonal expansion of tumor infiltrating lymphocytes.
Immune checkpoint therapy responders display early clonal expansion of tumor infiltrating lymphocytes.
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免疫检查点治疗(ICT)可使一部分患者产生持久的肿瘤缓解,但T细胞受体β(TCRβ)库动态如何促进治疗反应尚不清楚。利用排除宿主遗传背景、环境因素和肿瘤突变负荷差异的小鼠模型,将动物间差异限制在自然多样的TCRβ库范围内,我们应用TCRseq、单细胞RNAseq和流式细胞术研究ICT应答者和无应答者中TCRβ库动态。在应答肿瘤中观察到TCRβ克隆型的寡克隆扩增增加。机器学习鉴定了每种肿瘤模型特有的TCRβ CDR3特征,以及在ICT之前或期间不同时间点与ICT反应相关的特征。ICT后应答肿瘤中克隆扩增的CD8+ T细胞表现出效应T细胞基因特征和表型。ICT期间克隆扩增的早期爆发与反应相关,我们报告了与ICT反应相关的TCRβ特征的独特动态。
Immune checkpoint therapy (ICT) causes durable tumour responses in a subgroup of patients, but it is not well known how T cell receptor beta (TCRβ) repertoire dynamics contribute to the therapeutic response. Using murine models that exclude variation in host genetics, environmental factors and tumour mutation burden, limiting variation between animals to naturally diverse TCRβ repertoires, we applied TCRseq, single cell RNAseq and flow cytometry to study TCRβ repertoire dynamics in ICT responders and non-responders.
Increased oligoclonal expansion of TCRβ clonotypes was observed in responding tumours. Machine learning identified TCRβ CDR3 signatures unique to each tumour model, and signatures associated with ICT response at various timepoints before or during ICT. Clonally expanded CD8+ T cells in responding tumours post ICT displayed effector T cell gene signatures and phenotype. An early burst of clonal expansion during ICT is associated with response, and we report unique dynamics in TCRβ signatures associated with ICT response.
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