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构建二硫死亡相关糖酵解基因风险模型以预测胃腺癌的预后及免疫浸润分析

英文原题:Construction of a disulfidptosis-related glycolysis gene risk model to predict the prognosis and immune infiltration analysis of gastric adenocarcinoma.

查看英文原题

Construction of a disulfidptosis-related glycolysis gene risk model to predict the prognosis and immune infiltration analysis of gastric adenocarcinoma.

PubMed 2024/04/08(内容时间) Clin Transl Oncol Q3 · IF 2.7(JCR 2025)

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研究概要

本研究开发的风险模型在预测免疫治疗对 STAD 患者的影响及辅助化疗药物选择方面具有显著的临床价值。它能够准确评估 STAD 患者的预后。

研究思路结论见上方概要

最近发现了一种称为二硫死亡(disulfidptosis)的细胞死亡模式。二硫死亡可能影响肿瘤细胞的生长,代表了一种潜在的治疗肿瘤的新方法。糖酵解影响肿瘤增殖、侵袭、化疗耐药、肿瘤微环境(TME)和免疫逃逸。然而,二硫死亡相关糖酵解基因(DRGGs)在胃腺癌(STAD)中的疗效和治疗意义仍不确定。

从TCGA数据库下载STAD临床数据和RNA测序数据。使用Cox回归和Lasso回归分析筛选DRGGs,构建预后风险模型。通过生存研究、受试者工作特征(ROC)曲线、列线图和校准曲线验证模型的准确性。此外,我们的研究探讨了风险评分与免疫细胞浸润、肿瘤突变负荷(TMB)和抗癌药物敏感性之间的关系。

我们成功开发了一个包含4个DRGGs(NT5E、ALG1、ANKZF1和VCAN)的预后风险模型。该模型在预测STAD患者的总生存期方面表现出色。DRGGs预后模型与TME、免疫浸润细胞和治疗敏感性显著相关。

展开英文摘要原文

The pattern of cell death known as disulfidptosis was recently discovered. Disulfidptosis, which may affect the growth of tumor cells, represents a potential new approach to treating tumors. Glycolysis affects tumor proliferation, invasion, chemotherapy resistance, the tumor microenvironment (TME), and immune evasion. However, the efficacy and therapeutic significance of disulfidptosis-related glycolysis genes (DRGGs) in stomach adenocarcinoma (STAD) remain uncertain.

STAD clinical data and RNA sequencing data were downloaded from the TCGA database. DRGGs were screened using Cox regression and Lasso regression analysis to construct a prognostic risk model. The accuracy of the model was verified using survival studies, receiver operating characteristic (ROC) curves, column plots, and calibration curves. Additionally, our study investigated the relationships between the risk scores and immune cell infiltration, tumor mutational burden (TMB), and anticancer drug sensitivity.

We have successfully developed a prognosis risk model with 4 DRGGs (NT5E, ALG1, ANKZF1, and VCAN). The model showed excellent performance in predicting the overall survival of STAD patients. The DRGGs prognostic model significantly correlated with the TME, immune infiltrating cells, and treatment sensitivity.

The risk model developed in this work has significant clinical value in predicting the impact of immunotherapy in STAD patients and assisting in the choice of chemotherapeutic medicines. It can correctly estimate the prognosis of STAD patients.

论文信息

作者
Liao Z、Xie Z
第一作者单位
Department of Gastroenterology, The Second Affiliated Hospital of Nanchang University, No. 1 Minde Road, Donghu District, Nanchang, 330006, China.China
通讯作者单位
Department of Gastroenterology, The Second Affiliated Hospital of Nanchang University, No. 1 Minde Road, Donghu District, Nanchang, 330006, China. xzyxzy1230@163.com.China
期刊
Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico2024 Sep
原文标识
PubMed 38587603 · DOI 10.1007/s12094-024-03457-w