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高危和低危 STAD 中的差异基因突变与免疫细胞浸润:对预后和免疫治疗疗效的启示

英文原题:Differential genetic mutations and immune cell infiltration in high- and low-risk STAD: Implications for prognosis and immunotherapy efficacy.

查看英文原题

Differential genetic mutations and immune cell infiltration in high- and low-risk STAD: Implications for prognosis and immunotherapy efficacy.

PubMed 2024/04/01(内容时间) J Cell Mol Med Q2 · IF 4.7(JCR 2025)

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中文摘要

本研究探讨胃腺癌(STAD)中的基因突变和免疫细胞动态,重点在于识别预后标志物和治疗靶点。对 TCGA-STAD 样本的分析显示,C > A 是高危组和低危组中最常见的单核苷酸变异(SNV)。关键突变驱动基因包括 TTN、TP53 和 MUC16,其中移码突变在低危组中更为常见,而错义突变在高危组中更为常见。对 C1QA 和 CD68 等核心基因的相互作用分析显示存在显著相关性,并影响免疫细胞浸润模式。使用 ssGSEA,我们发现高危组中免疫细胞浸润更高(B 细胞、CD4 + T 细胞、CD8 + T 细胞、DC 细胞、NK 细胞),且与风险评分升高相关。xCell 算法结果表明,两组之间的免疫浸润水平存在明显差异。

该研究的风险评分模型在预后预测和免疫治疗疗效评估方面被证明有效。CD28、CD27 和 SLAMF7 等关键分子与风险评分显著相关,提示其可能成为高危 STAD 患者的潜在靶点。药物敏感性分析显示,风险评分与对某些治疗的敏感性呈负相关,提示高危 STAD 患者可能具有潜在治疗选择。

我们还通过表型实验验证了 RPL14 在胃癌中的致癌作用,证明其影响癌细胞增殖、侵袭和迁移。总体而言,本研究为 STAD 的遗传和免疫方面提供了重要见解,强调了风险评分模型在胃癌管理中个体化治疗策略和临床决策中的重要性。

展开英文摘要原文

This study investigates genetic mutations and immune cell dynamics in stomach adenocarcinoma (STAD), focusing on identifying prognostic markers and therapeutic targets. Analysis of TCGA-STAD samples revealed C > A as the most common single nucleotide variant (SNV) in both high and low-risk groups. Key mutated driver genes included TTN, TP53 and MUC16, with frame-shift mutations more prevalent in the low-risk group and missense mutations in the high-risk group. Interaction analysis of hub genes such as C1QA and CD68 showed significant correlations, impacting immune cell infiltration patterns.

Using ssGSEA, we found higher immune cell infiltration (B cells, CD4 + T cells, CD8 + T cells, DC cells, NK cells) in the high-risk group, correlated with increased risk scores. xCell algorithm results indicated distinct immune infiltration levels between the groups. The study's risk scoring model proved effective in prognosis prediction and immunotherapy efficacy assessment.

Key molecules like CD28, CD27 and SLAMF7 correlated significantly with risk scores, suggesting potential targets for high-risk STAD patients. Drug sensitivity analysis showed a negative correlation between risk scores and sensitivity to certain treatments, indicating potential therapeutic options for high-risk STAD patients.

We also validated the carcinogenic role of RPL14 in gastric cancer through phenotypic experiments, demonstrating its influence on cancer cell proliferation, invasion and migration.

Overall, this research provides crucial insights into the genetic and immune aspects of STAD, highlighting the importance of a risk scoring model for personalized treatment strategies and clinical decision-making in gastric cancer management.

论文信息

作者
Deng YY、Sun Y、Wu SJ、Zhang TY、Yang J、Liu K
单位
Department of General Surgery, West China Hospital, Sichuan University, Chengdu, China.China
文献类型
已撤稿
期刊
Journal of cellular and molecular medicine2024 Apr
原文标识
PubMed 38494839 · DOI 10.1111/jcmm.18174