CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Pan-cancer analysis reveals PDK family as potential indicators related to prognosis and immune infiltration.
Pan-cancer analysis reveals PDK family as potential indicators related to prognosis and immune infiltration.
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丙酮酸脱氢酶激酶(PDKs)通过磷酸化对丙酮酸脱氢酶复合体(PDC)活性发挥负向调控作用,在葡萄糖代谢中扮演关键角色。抑制PDKs具有增强PDC活性、促使细胞采用更偏向有氧代谢模式的潜力。
因此,PDKs成为代谢失调相关疾病(包括恶性肿瘤和糖尿病)的有前景的靶点。然而,对不同PDK家族成员(尤其是PDK3)在多种肿瘤类型中独特贡献的全面探索仍不完整。
本研究利用TCGA和GTEx数据集,对PDK家族表达模式进行系统性研究,并建立与临床参数的关联。通过Kaplan-Meier分析和COX回归分析对PDKs进行生存分析。
此外,利用CIBERSORT算法评估免疫浸润程度。我们的研究揭示了PDK家族成员之间显著的遗传异质性,并伴有可辨别的临床特征。
重要的是,该研究确立了PDK家族基因作为预后指标和治疗反应预测因子的潜在效用。此外,我们的研究揭示了PDK家族的免疫浸润特征。
结果表明,这些基因与免疫相关指标密切相关,包括免疫评分、免疫亚型、TIL(肿瘤浸润淋巴细胞)和免疫检查点表达。总之,本研究的发现为指导治疗方向提供了有见地的策略,旨在利用PDK家族基因在癌症治疗中的影响。
Pyruvate dehydrogenase kinases (PDKs) play a key role in glucose metabolism by exerting negative regulation over pyruvate dehyrogenase complex (PDC) activity through phosphorylation. Inhibition of PDKs holds the potential to enhance PDC activity, prompting cells to adopt a more aerobic metabolic profile. Consequently, PDKs emerge as promising targets for condition rooted in metabolic dysregulation, including malignance and diabetes.
However, a comprehensive exploration of the distinct contribution of various PDK family members, particularly PDK3, across diverse tumor types remain incomplete.
This study undertakes a systematic investigation of PDK family expression patterns, forging association with clinical parameters, using data from the TCGA and GTEx datasets. Survival analysis of PDKs is executed through both Kaplan-Meier analysis and COX regression analysis.
Furthermore, the extent of immune infiltration is assessed by leveraging the CIBERSORT algorithm.
Our study uncovers pronounced genetic heterogeneity among PDK family members, coupled with discernible clinical characteristic. Significantly, the study establishes the potential utility of PDK family genes as prognostic indicators and as predictors of therapeutic response.
Additionally, our study sheds light on the immune infiltration profile of PDK family. The results showed the intimate involvement of these genes in immune-related metrics, including immune scoring, immune subtypes, tumor-infiltrating lymphocytes, and immune checkpoints expression. In sum, the findings of this study offer insightful strategies to guide the therapeutic direction, aiming at leveraging the impact of PDK family genes in cancer treatment.
在 PubMed 查看 → 出版商原文(DOI) 全文 PDF(PMC)· 可下载 治疗专题与资料阅读指南 资料来源与翻译说明 报告译文或资料问题 →
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