← 返回

弥漫性大 B 细胞淋巴瘤中 CISD2 预后意义及免疫浸润的综合分析

英文原题:Comprehensive analysis of the prognostic implication and immune infiltration of CISD2 in diffuse large B-cell lymphoma.

查看英文原题

Comprehensive analysis of the prognostic implication and immune infiltration of CISD2 in diffuse large B-cell lymphoma.

PubMed 2023/12/12(内容时间) Front Immunol Q1 · IF 7(JCR 2025)

分数与星级只用于站内排序 —— 不代表疗效、安全性或个人适用性。

研究概要

我们的研究表明,DLBCL 患者中 CISD2 高表达与不良预后相关。我们成功构建并验证了一个包含 27 个基因的 CISD2Risk,其具有良好的预后预测和疗效监测价值。同时,CISD2Risk 可能是免疫浸润的一个有前景的评估指标,并可为 DLBCL 患者的临床决策提供参考。

研究思路结论见上方概要

弥漫性大B细胞淋巴瘤(DLBCL)是成人中最常见的B细胞淋巴瘤。CDGSH铁硫结构域2(CISD2)是一种铁硫蛋白,在细胞增殖中发挥关键作用。CISD2的异常表达与多种癌症的进展相关。然而,其在DLBCL中的作用仍不清楚。

通过公共数据库鉴定CISD2的差异表达,并使用qRT-PCR和western blot鉴定CISD2的表达。我们使用Kaplan-Meier plotter评估CISD2对临床预后的影响。同时,使用CellMiner数据库评估CISD2的药物敏感性。从STRING获取100个CISD2相关基因,并使用LASSO Cox回归进行分析。建立了CISD2相关特征的风险模型(CISD2Risk)。进行了CISD2Risk的PPI网络分析,并通过DAVID数据库进行功能富集分析。分析了CISD2Risk对临床特征的影响。使用ESTIMATE、CIBERSORT和MCP-counter算法鉴定CISD2Risk与免疫浸润的关联。随后,应用单因素和多因素Cox回归分析,并构建了预后列线图及校准曲线,以预测1年、3年和5年生存概率。

CISD2在DLBCL患者中较正常对照通过公共数据集上调,同样,CISD2在DLBCL细胞系中高表达。基于GSE31312、GSE32918和GSE93984数据集,CISD2过表达与DLBCL患者不良预后相关(P<0.05)。九种药物被认为是CISD2的潜在治疗药物。通过使用LASSO cox回归,鉴定出二十七个基因以构建CISD2Risk,这些基因的生物学功能可能涉及凋亡和P53信号通路。高CISD2Risk值具有更差的预后和治疗效果(P<0.05)。较高的基质评分、免疫评分和ESTIMATE评分与较低的CISD2Risk值相关,CISD2Risk与几种免疫浸润细胞(巨噬细胞M0和M1、CD8 T细胞、CD4初始T细胞、NK细胞等)呈负相关,这些细胞可能与更好的预后相关。此外,通过单变量和多变量Cox回归,高CISD2Risk被确定为DLBCL患者的独立预后因素。列线图产生了准确的预测,校准曲线具有良好的一致性。

展开英文摘要原文

Diffuse large B-cell lymphoma (DLBCL) is the most common B-cell lymphoma in adults. CDGSH iron sulfur domain 2 (CISD2) is an iron-sulfur protein and plays a critical role of cell proliferation. The aberrant expression of CISD2 is associated with the progression of multiple cancers. However, its role in DLBCL remains unclear.

The differential expression of CISD2 was identified via public databases, and quantitative real-time PCR (qRT-PCR) and western blot were used to identifed the expression of CISD2. We estimated the impact of CISD2 on clinical prognosis using the Kaplan-Meier plotter. Meanwhile, the drug sensitivity of CISD2 was assessed using CellMiner database. The 100 CISD2-related genes from STRING obtained and analyzed using the LASSO Cox regression. A CISD2 related signature for risk model (CISD2Risk) was established. The PPI network of CISD2Risk was performed, and functional enrichment was conducted through the DAVID database. The impacts of CISD2Risk on clinical features were analyzed. ESTIMATE, CIBERSORT, and MCP-counter algorithm were used to identify CISD2Risk associated with immune infiltration. Subsequently, Univariate and multivariate Cox regression analysis were applied, and a prognostic nomogram, accompanied by a calibration curve, was constructed to predict 1-, 3-, and 5-years survival probabilities.

CISD2 was upregulated in DLBCL patients comparing with normal controls via public datasets, similarly, CISD2 was highly expressed in DLBCL cell lines. Overexpression of CISD2 was associated with poor prognosis in DLBCL patients based on the GSE31312, the GSE32918, and GSE93984 datasets (P<0.05). Nine drugs was considered as a potential therapeutic agents for CISD2. By using the LASSO cox regression, twenty seven genes were identified to construct CISD2Risk, and biological functions of these genes might be involved in apoptosis and P53 signaling pathway. The high CISD2Risk value had a worse prognosis and therapeutic effect (P<0.05). The higher stromal score, immune score, and ESTIMATE score were associated with lowe CISD2Risk value, CISD2Risk was negatively correlated with several immune infiltrating cells (macrophages M0 and M1, CD8 T cells, CD4 naïve T cells, NK cell, etc) that might be correlated with better prognosis. Additionally, The high CISD2Risk was identified as an independent prognostic factor for DLBCL patients using both univariate and multivariate Cox regression. The nomogram produced accurate predictions and the calibration curves were in good agreement.

Our study demonstrates that high expression of CISD2 in DLBCL patients is associated with poor prognosis. We have successfully constructed and validated a good prognostic prediction and efficacy monitoring for CISD2Risk that included 27 genes. Meanwhile, CISD2Risk may be a promising evaluator for immune infiltration and serve as a reference for clinical decision-making in DLBCL patients.

论文信息

作者
Zhang C、Lin Q、Li C、Qiu Y、Chen J、Zhu X
单位
Department of Haematology, Quanzhou First Hospital Affiliated to Fujian Medical University, Quanzhou, China.China
文献类型
非美国政府资助研究
期刊
Frontiers in immunology2023
原文标识
PubMed 38155967 · DOI 10.3389/fimmu.2023.1277695