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基于深度学习的图像分析预测淋巴瘤对 CAR-T 细胞的反应

英文原题:Prediction of lymphoma response to CAR T cells by deep learning-based image analysis.

查看英文原题

Prediction of lymphoma response to CAR T cells by deep learning-based image analysis.

PubMed 2023/07/21(内容时间) PLoS One Q2 · IF 2.8(JCR 2025)

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中文摘要

临床预后评分系统在预测淋巴瘤治疗结局方面效用有限。因此,我们测试了一种基于深度学习(DL)的图像分析方法在治疗前诊断性计算机断层扫描(dCT)、低剂量CT(lCT)和18F-氟脱氧葡萄糖正电子发射断层扫描(FDG-PET)图像上的可行性,并结合基于规则的推理来预测B细胞淋巴瘤对嵌合抗原受体(CAR)T细胞疗法的治疗反应。分析了39例接受CD19靶向CAR-T 细胞治疗的成人B细胞淋巴瘤患者的770个淋巴结病灶的治疗前图像。使用预训练神经网络模型进行迁移学习,然后针对特定任务重新训练,用于从单独的dCT、lCT和FDG-PET图像预测病灶水平的治疗反应。通过将基于规则的推理应用于病灶水平预测结果,进行患者水平的反应分析。

患者水平的反应预测还与基于弥漫性大B细胞淋巴瘤国际预后指数(IPI)的预测进行了比较。基于单个完整dCT切片输入进行病灶水平反应预测的平均准确率为0.82+0.05,敏感性为0.87+0.07,特异性为0.77+0.12,AUC为0.91+0.03。以治疗后12个月患者反应作为参考标准,使用“Majority 60%”规则从dCT进行患者水平反应预测的准确率为0.81,敏感性为0.75,特异性为0.88,并且优于基于IPI风险因素的反应预测(准确率0.54,敏感性0.38,特异性0.61(p = 0.046))。使用基于DL的图像分析和基于规则的推理从治疗前医学图像预测B细胞淋巴瘤的治疗结局是可行的。这种方法有可能在启动CAR-T 细胞治疗之前为决策提供具有临床实用价值的预后信息。

展开英文摘要原文

Clinical prognostic scoring systems have limited utility for predicting treatment outcomes in lymphomas.

We therefore tested the feasibility of a deep-learning (DL)-based image analysis methodology on pre-treatment diagnostic computed tomography (dCT), low-dose CT (lCT), and 18F-fluorodeoxyglucose positron emission tomography (FDG-PET) images and rule-based reasoning to predict treatment response to chimeric antigen receptor (CAR) T-cell therapy in B-cell lymphomas. Pre-treatment images of 770 lymph node lesions from 39 adult patients with B-cell lymphomas treated with CD19-directed CAR T-cells were analyzed. Transfer learning using a pre-trained neural network model, then retrained for a specific task, was used to predict lesion-level treatment responses from separate dCT, lCT, and FDG-PET images. Patient-level response analysis was performed by applying rule-based reasoning to lesion-level prediction results. Patient-level response prediction was also compared to prediction based on the international prognostic index (IPI) for diffuse large B-cell lymphoma.

The average accuracy of lesion-level response prediction based on single whole dCT slice-based input was 0. 82+0. 05 with sensitivity 0. 87+0. 07, specificity 0. 77+0. 12, and AUC 0. 91+0. 03. Patient-level response prediction from dCT, using the "Majority 60%" rule, had accuracy 0. 81, sensitivity 0. 75, and specificity 0. 88 using 12-month post-treatment patient response as the reference standard and outperformed response prediction based on IPI risk factors (accuracy 0.

54, sensitivity 0. 38, and specificity 0. 61 (p = 0. 046)). Prediction of treatment outcome in B-cell lymphomas from pre-treatment medical images using DL-based image analysis and rule-based reasoning is feasible. This approach can potentially provide clinically useful prognostic information for decision-making in advance of initiating CAR T-cell therapy.

论文信息

作者
Tong Y、Udupa JK、Chong E、Winchell N、Sun C、Zou Y、Schuster SJ、Torigian DA
单位
Medical Image Processing Group, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.United States
文献类型
美国 NIH 资助研究
期刊
PloS one2023
原文标识
PubMed 37478073 · DOI 10.1371/journal.pone.0282573