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通过整合系统方法鉴定出不利于 T 细胞免疫的癌症基因

英文原题:Cancer genes disfavoring T cell immunity identified via integrated systems approach.

查看英文原题

Cancer genes disfavoring T cell immunity identified via integrated systems approach.

PubMed 2022/08/02(内容时间) Cell Rep Q1 · IF 7.7(JCR 2025)

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中文摘要

过继性T细胞疗法(ACT)对少数癌症患者具有治愈效果。使癌细胞对T细胞杀伤敏感化可能扩大这些疗法对更多患者的益处。为此,我们采用三步法来鉴定不利于T细胞免疫的癌症基因。首先,我们分析在T细胞杀伤选择压力下癌症上调的基因转录本。其次,我们利用信号通路激活文库和全基因组功能缺失CRISPR-Cas9筛选,鉴定不利于T细胞杀伤的潜在肿瘤基因靶点和通路。最后,我们实施药理学扰动筛选以验证这些靶点,并确定BIRC2、ITGAV、DNPEP、BCL2和ERRα作为潜在的ACT-药物联合候选方案。在此,我们证实BIRC2通过抑制IRF1活性限制抗原呈递和T细胞对肿瘤细胞的识别,并提供证据表明BIRC2抑制联合ACT是提高疗效的有效策略。

展开英文摘要原文

Adoptive T cell therapies (ACT) have been curative for a limited number of cancer patients. The sensitization of cancer cells to T cell killing may expand the benefit of these therapies for more patients. To this end, we use a three-step approach to identify cancer genes that disfavor T cell immunity.

First, we profile gene transcripts upregulated by cancer under selection pressure from T cell killing. Second, we identify potential tumor gene targets and pathways that disfavor T cell killing using signaling pathway activation libraries and genome-wide loss-of-function CRISPR-Cas9 screens.

Finally, we implement pharmacological perturbation screens to validate these targets and identify BIRC2, ITGAV, DNPEP, BCL2, and ERRα as potential ACT-drug combination candidates.

Here, we establish that BIRC2 limits antigen presentation and T cell recognition of tumor cells by suppressing IRF1 activity and provide evidence that BIRC2 inhibition in combination with ACT is an effective strategy to increase efficacy.

论文信息

作者
Kishton RJ、Patel SJ、Decker AE、Vodnala SK、Cam M、Yamamoto TN、Patel Y、Sukumar M
第一作者单位
Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD 20892, USA; Center for Cell-Based Therapy, National Cancer Institute, Bethesda, MD 20892, USA. Electronic address: kishtonr@gmail.com.United States
通讯作者单位
Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD 20892, USA; Center for Cell-Based Therapy, National Cancer Institute, Bethesda, MD 20892, USA. Electronic address: drnickrestifo@gmail.com.United States
文献类型
非美国政府资助研究 · 美国 NIH 院内研究 · 美国 NIH 资助研究
期刊
Cell reports2022 Aug 2
原文标识
PubMed 35926468 · DOI 10.1016/j.celrep.2022.111153