研究概要
CRISPR/Cas9介导的基因敲除在患者来源的OvCa TIL中使用临床可扩展的方法是可行且高效的。我们实现了高效且特异性的TGFBR2敲除,产生了扩增的OvCa TIL产品,该产品对TGF- 的免疫抑制效应具有抗性。本研究为CRISPR修饰TIL的临床转化奠定了基础,不仅为OvCa治疗,也为其他实体癌的治疗提供了工程化更强效TIL疗法的机会。
研究思路结论见上方概要
背景
T细胞浸润升高与卵巢癌(OvCa)患者生存改善之间的相关性表明,内源性TIL(肿瘤浸润淋巴细胞)具有一定程度的抗肿瘤活性,可用于OvCa免疫治疗。我们此前优化了用于过继细胞治疗的OvCa TIL体外扩增方案,目前正在我们机构的临床试验中进行测试(NCT03610490)。在此基础上,我们开始对OvCa TIL进行基因修饰,以克服肿瘤微环境中存在的关键免疫抑制因素。在此,我们展示了在患者来源的OvCa TIL中,CRISPR/Cas9介导的TGF-受体2(TGFBR2)敲除的临床前优化。
方法
OvCa TIL 由四位患者手术切除获得的肿瘤样本生成,并在进行快速扩增方案前接受 CRISPR/Cas9 介导的 TGFBR2 敲除。针对 TGFBR2 的 gRNA 就其 TGFBR2 敲除效率和脱靶活性进行了全面评估。此外,还检测了 TGFBR2 敲除对 TIL 扩增、功能及下游信号传导的影响。
结果
在四个独立的OvCa TIL样本中测试了5条gRNA,TGFBR2敲除效率达到59 6%至100 0%。TGFBR2敲除的TIL对免疫抑制性TGF-信号具有抗性,表现为缺乏SMAD磷酸化、对TGF-刺激缺乏全局转录变化、在存在和不存在TGF-时均能同等强度地分泌促炎细胞因子,以及在存在TGF-时细胞毒性改善。CRISPR修饰本身未改变OvCa TIL的离体扩增效率、免疫表型,也未改变其TCR克隆多样性。对于临床转化具有重要意义的是,对CRISPR脱靶效应的全面分析显示,我们排名前两位的TGFBR2靶向gRNA均无脱靶活性证据。
展开英文摘要原文
BACKGROUND: The correlation between elevated T-cell infiltration and improved survival of ovarian cancer (OvCa) patients suggests that endogenous tumor-infiltrating lymphocytes (TIL) possess some degree of antitumor activity that can be harnessed for OvCa immunotherapy. We previously optimized a protocol for ex vivo OvCa TIL expansion for adoptive cell therapy, which is now being tested in a clinical trial at our institution (NCT03610490). Building on this success, we embarked on genetic modification of OvCa TIL to overcome key immunosuppressive factors present in the tumor microenvironment. Here, we present the preclinical optimization of CRISPR/Cas9-mediated knockout of the TGF- receptor 2 ( TGFBR2 ) in patient-derived OvCa TIL.
METHODS: OvCa TILs were generated from four patients' tumor samples obtained at surgical resection and subjected to CRISPR/Cas9-mediated knockout of TGFBR2 before undergoing a rapid expansion protocol. TGFBR2 -directed gRNAs were comprehensively evaluated for their TGFBR2 knockout efficiency and off-target activity. Furthermore, the impact of TGFBR2 knockout on TIL expansion, function, and downstream signaling was assayed.
RESULTS: TGFBR2 knockout efficiencies ranging from 59 6% to 100% 0% were achieved using 5 gRNAs tested in four independent OvCa TIL samples. TGFBR2 knockout TIL were resistant to immunosuppressive TGF- signaling as evidenced by a lack of SMAD phosphorylation, a lack of global transcriptional changes in response to TGF- stimulation, equally strong secretion of proinflammatory cytokines in the presence and absence of TGF- , and improved cytotoxicity in the presence of TGF- . CRISPR-modification itself did not alter the ex vivo expansion efficiency, immunophenotype, nor the TCR clonal diversity of OvCa TIL. Importantly for clinical translation, comprehensive analysis of CRISPR off-target effects revealed no evidence of off-target activity for our top two TGFBR2 -targeting gRNAs.
CONCLUSIONS: CRISPR/Cas9-mediated gene knockout is feasible and efficient in patient-derived OvCa TIL using clinically-scalable methods. We achieved efficient and specific TGFBR2 knockout, yielding an expanded OvCa TIL product that was resistant to the immunosuppressive effects of TGF- . This study lays the groundwork for clinical translation of CRISPR-modified TIL, providing opportunities for engineering more potent TIL therapies not only for OvCa treatment, but for the treatment of other solid cancers as well.
论文信息
- 作者
- Fix SM、Forget MA、Sakellariou-Thompson D、Wang Y、Griffiths TM、Lee M、Haymaker CL、Dominguez AL
- 第一作者单位
- Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.United States
- 通讯作者单位
- Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA Patrick.Hwu@moffitt.org.United States
- 文献类型
- 非美国政府资助研究 · 美国 NIH 资助研究
- 期刊
- Journal for immunotherapy of cancer2022 Jul