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胰腺腺癌中赖氨酰氧化酶家族成员预后与免疫浸润的综合分析及实验验证

英文原题:Comprehensive Analysis on Prognosis and Immune Infiltration of Lysyl Oxidase Family Members in Pancreatic Adenocarcinoma With Experimental Verification.

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Comprehensive Analysis on Prognosis and Immune Infiltration of Lysyl Oxidase Family Members in Pancreatic Adenocarcinoma With Experimental Verification.

PubMed 2022/04/01(内容时间) Front Mol Biosci Q2 · IF 4.4(JCR 2025)

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中文摘要

胰腺腺癌(PDAC)是所有实体恶性肿瘤中侵袭性最强的一种,疾病发现延迟且有效治疗有限。然而,由于复杂的异质性和独特的肿瘤微环境(TME),有效疗法的开发一直面临巨大挑战。赖氨酰氧化酶(LOXs)支撑着TME的塑造,从而促进癌症生长、转移并调节治疗反应。

从多个开放获取数据库中总结并分析了PDAC中LOXs的mRNA表达、预后和临床病理数据。通过免疫组织化学(IHC)验证蛋白表达。通过LinkedOmics预测并阐述了LOXs的共表达基因。使用基因本体论(GO)和京都基因与基因组百科全书(KEGG)对LOXs共表达基因进行功能富集分析。应用TIMER和TISIDB分析LOXs表达与免疫浸润之间的关系。

LOX、LOXL1和LOXL2的mRNA表达水平在PDAC中显著升高,LOXL3和LOXL4的表达水平在不同数据库中相反。LOX和LOXL2的高mRNA水平与晚期PDAC分期相关,而LOX和LOXL3表达升高与高肿瘤分级相关。IHC染色显示PDAC组织中LOX、LOXL1和LOXL2表达水平较高,LOXL3表达水平较低,而LOXL4的蛋白表达无差异。功能富集分析显示,除LOXL3及其配体与免疫相关功能高度相关外,其余与细胞外基质(ECM)调控密切相关。进一步分析表明,LOX 和 LOXL3 与TIL(肿瘤浸润淋巴细胞)(TILs)、多种免疫特征和免疫检查点高度相关。最后,生存分析显示,LOX 和 LOXL2 高表达预示更差的总生存期(OS)、无进展间期(PFI)和疾病特异性生存期(DSS)。

这些发现表明,LOX 家族,尤其是 LOX 和 LOXL2,可能在 PDAC 肿瘤发生中具有前瞻性价值,它们可能成为预后生物标志物,揭示了一个有前景的靶向治疗领域。

展开英文摘要原文

Background: Pancreatic adenocarcinoma (PDAC) is the most aggressive among all solid malignancies with delayed disease detection and limited effective treatment.

However, due to the intricate heterogeneity and exclusive tumor microenvironment (TME), the development of effective therapy has been facing enormous challenges. The lysyl oxidases (LOXs) underpin the shaping of the TME to promote cancer growth, metastasis and modulate response to treatment. Materials and Methods: The mRNA expression, prognostic, and clinicopathological data for LOXs in PDAC from multiple open-access databases were summarized and analyzed. The protein expression was verified by immunohistochemistry (IHC). Co-expressed genes of LOXs were predicted and elaborated by LinkedOmics. Functional enrichment analysis of LOXs co-expressed genes was performed using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG).

TIMER and TISIDB were applied to analyze the relationship between LOXs expression and immune infiltration. Results: The mRNA expression levels of LOX, LOXL1 and LOXL2 were significantly higher in PDAC, the expression levels of LOXL3 and LOXL4 were contrary in different databases. High mRNA levels of LOX and LOXL2 were associated with advanced PDAC stage, while elevated LOX and LOXL3 expression correlated with high tumor grade.

The IHC staining showed higher expression levels of LOX, LOXL1 and LOXL2, lower expression level of LOXL3 in PDAC tissues, while the protein expression of LOXL4 made no difference. Functional enrichment analysis showed a close relationship with extracellular matrix (ECM) regulation, except that LOXL3 and its ligands were highly associated with immune-related functions.

Further analysis suggested that LOX and LOXL3 strongly correlated with tumor-infiltrating lymphocytes (TILs), various immune signatures, and immune checkpoints.

Finally, survival analysis revealed high LOX and LOXL2 expression predicted worse overall survival (OS), progression-free interval (PFI), and disease-specific survival (DSS). Conclusion: These findings indicated that the LOX family, especially LOX and LOXL2, might have a prospective value in PDAC oncogenesis, and they may become prognostic biomarkers, revealing a promising field in targeted therapy.

论文信息

作者
Jiang C、Wang M、Yao W、Lv G、Liu X、Wang G
单位
Department of Hepatobiliary Pancreatic Surgery I, The First Hospital of Jilin University, Changchun, China.China
期刊
Frontiers in molecular biosciences2022
原文标识
PubMed 35433829 · DOI 10.3389/fmolb.2022.778857