RNF43 p.G659fs 通过 PI3K/AKT/mTOR 信号通路和 HLA-E 上调导致 MSI-high 结直肠癌中 NK 细胞功能障碍
RNF43 p.G659fs leads to natural killer cell dysfunction in MSI-high colorectal cancer through PI3K/AKT/mTOR signaling and HLA-E up-regulation.
CELL INTELLIGENCE · 肿瘤细胞治疗研究
肿瘤细胞治疗研究
英文原题:Identification of GGT5 as a Novel Prognostic Biomarker for Gastric Cancer and its Correlation With Immune Cell Infiltration.
Identification of GGT5 as a Novel Prognostic Biomarker for Gastric Cancer and its Correlation With Immune Cell Infiltration.
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胃癌(GC)是消化系统常见的恶性肿瘤。近期研究表明,高表达γ-谷氨酰转移酶5(GGT5)与胃癌患者的不良预后相关。在本研究中,我们旨在确认GGT5在胃癌中的表达及预后价值,以及其与免疫细胞浸润的相关性。首先,我们利用最广泛可用的数据,比较了癌症基因组图谱(TCGA)和GEO NCBI数据库中胃癌组织与正常胃黏膜之间GGT5的差异表达。然后,应用Kaplan-Meier法、Cox回归和单因素logistic回归探讨GGT5与临床特征之间的关系。
我们还研究了GGT5与免疫细胞浸润、免疫相关基因和免疫检查点基因的相关性。最后,我们利用GO注释、KEGG和GSEA通路数据评估了基因本体类别的富集及相关信号通路。
结果显示,与正常组织相比,GGT5在胃癌组织中表达上调。GGT5高表达与T分期、组织学类型和组织学分级显著相关(p < 0.05)。
此外,GGT5高表达的胃癌患者10年总生存期(p = 0.008)和无进展间期(p = 0.006)均差于GGT5低表达患者。多因素分析提示,GGT5高表达是与胃癌患者较差总生存期相关的独立危险因素。构建了用于预测GC总生存期的列线图模型并进行了计算验证。GGT5表达与NK 细胞、巨噬细胞和树突状细胞的浸润呈正相关,但与Th17浸润呈负相关。
此外,我们发现GGT5与免疫相关基因和免疫检查点基因呈正向共表达。功能分析显示,相对于GGT5的差异表达基因主要参与免疫和炎症反应的生物学过程。
总之,GGT5可能作为GC有前景的预后生物标志物和潜在的免疫治疗靶点,因为它与肿瘤微环境中的免疫细胞浸润相关。
Gastric cancer (GC) is a common malignant tumor of the digestive system. Recent studies revealed that high gamma-glutamyl-transferase 5 ( GGT5 ) expression was associated with a poor prognosis of gastric cancer patients. In the present study, we aimed to confirm the expression and prognostic value of GGT5 and its correlation with immune cell infiltration in gastric cancer.
First, we compared the differential expression of GGT5 between gastric cancer tissues and normal gastric mucosa in the cancer genome atlas (TCGA) and GEO NCBI databases using the most widely available data. Then, the Kaplan-Meier method, Cox regression, and univariate logistic regression were applied to explore the relationships between GGT5 and clinical characteristics.
We also investigated the correlation of GGT5 with immune cell infiltration, immune-related genes, and immune checkpoint genes.
Finally, we estimated enrichment of gene ontologies categories and relevant signaling pathways using GO annotations, KEGG, and GSEA pathway data. The results showed that GGT5 was upregulated in gastric cancer tissues compared to normal tissues. High GGT5 expression was significantly associated with T stage, histological type, and histologic grade ( p < 0. 05).
Moreover, gastric cancer patients with high GGT5 expression showed worse 10-years overall survival ( p = 0. 008) and progression-free intervals ( p = 0. 006) than those with low GGT5 expression. Multivariate analysis suggested that high expression of GGT5 was an independent risk factor related to the worse overall survival of gastric cancer patients.
A nomogram model for predicting the overall survival of GC was constructed and computationally validated. GGT5 expression was positively correlated with the infiltration of natural killer cells, macrophages, and dendritic cells but negatively correlated with Th17 infiltration.
Additionally, we found that GGT5 was positively co-expressed with immune-related genes and immune checkpoint genes. Functional analysis revealed that differentially expressed genes relative to GGT5 were mainly involved in the biological processes of immune and inflammatory responses.
In conclusion, GGT5 may serve as a promising prognostic biomarker and a potential immunological therapeutic target for GC, since it is associated with immune cell infiltration in the tumor microenvironment.
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